| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00055 |
|---|
| Symbol | |
|---|
| ID | 5555753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 57234 |
|---|
| End bp | 59333 |
|---|
| Gene Length | 2100 bp |
|---|
| Protein Length | 699 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640905551 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001443342 |
|---|
| Protein GI | 156972435 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCGCA AAACTCCTAT TGAGCGCTAC CGTAACATCG GTATCTGTGC TCACGTAGAT
GCAGGTAAAA CAACCACTAC TGAACGTATT CTGTTCTACA CTGGTCTGTC TCATAAAATC
GGTGAAGTTC ACGATGGCGC AGCAACCATG GACTGGATGG AGCAGGAGCA AGAACGTGGT
ATCACAATCA CGTCTGCGGC GACTACTACC TTCTGGCGTG GTATGGAAGC ACAATTCCAA
GAGCACCGCG TTAACATCAT CGACACTCCT GGACACGTTG ACTTTACTAT CGAAGTAGAG
CGTTCTCTAC GCGTACTTGA TGGTGCAGTT GTTGTGTTCT GTGGTTCATC TGGTGTTGAA
CCTCAGTCTG AAACTGTATG GCGTCAAGCT GACAAGTACC ACGTTCCACG TATGGTATTT
GTAAACAAGA TGGACCGTGC AGGCGCTGAC TTCCTACGCG TTGTGGACCA AATCAAAAAC
CGTCTTGGTG CGAATCCTGT TCCAATCCAA CTGAACGTTG GTGCAGAAGA TGATTTCCGT
GGTGTTATCG ACCTTATCAA GATGAAGATG ATCAACTGGA ATGAAGCTGA CCAAGGCATG
TCGTTTACAT ACGACGAAAT TCCAGCTGAC ATGCAAGAGC TTGCTGAAGA GTGGCGCAAC
AACCTAGTTG AAGCGGCAGC AGAAGCAACT GAAGAGCTAA TGGACAAGTA CCTTGAAGAA
GGTGAACTGT CTGAAGCTGA AATCAAACAA GCTCTACGTA CTCGTACACT AAACAACGAA
ATCGTACTGG CTACTTGTGG TAGTGCGTTC AAAAACAAAG GTGTTCAGGC AGTACTAGAC
GCAGTGATCG AGTTCTTGCC ATCGCCAGTT GATGTTCCTG CAATTAAAGG TATCGACGAA
AAAGAGAACG AAGTTGAACG TCACGCAGAC GATAACGAAC CGTTCTCAGC ACTAGCATTC
AAGATCGCGA CTGACCCATT CGTGGGCACG CTAACTTTCA TGCGCGTTTA CTCAGGTGTT
GTAAACTCAG GTGATGCTGT TTACAACTCA GTAAAAGACA AGAAAGAGCG TTTCGGTCGT
ATCGTTCAGA TGCATGCGAA CAAGCGTGAA GAAGTAAAAG AAGTTCGCGC TGGTGATATC
GCAGCTGCTA TCGGTCTGAA AGACGTTACA ACAGGTGACA CGCTATGTGA CCAGAACCAC
AAAGTGATTC TAGAGCGCAT GGAGTTCCCT GAGCCTGTAA TTCAGATCGC TGTAGAACCT
CGTTCTAAAG CAGACCAAGA GAAAATGGGT ATCGCGCTAG GTAAACTGGC AGCGGAAGAC
CCATCATTCC GCGTGGAAAC GGATGACGAA ACAGGCCAGA CTCTGATCTC TGGTATGGGT
GAGCTTCACC TAGATATCAT CGTTGACCGT ATGAAGCGTG AATTCAGCGT TGACTGTAAC
GTTGGTAAAC CTCAGGTTGC TTACCGTGAA ACCATTCGTG GCAAAGCGGA AGTTGAAGGC
AAGTTCGTTC GTCAATCTGG CGGTCGCGGT CAATACGGTC ACGTATGGAT CACACTTGAA
CCTTCAGAGC CTGGTGAAGG TTTCGTATTC GTAGACGAGA TTGTGGGTGG TGTGGTTCCT
AAGGAATACA TCAGCTCGGT ATCGAAAGGT ATCGAAGAAC AAATGAATAG TGGTGTTCTA
GCGGGTTACC CTGTTCTAGA TATTAAAGCA ACACTATTTG ACGGTTCTTA CCACGATGTT
GACTCAAGCG AGATGGCGTT CAAGATCGCT GGCTCGATGG CATTCAAGAA AGGTGCACTA
GAAGCACAAC CTGTGATTCT AGAACCAATG ATGAATGTTG AAGTAACTAC GCCGGAAGAT
TGGATGGGTG ACGTTGTTGG TGACCTAAAC CGTCGCCGCG GTATGATCGA AGGTATGGAT
GAAGGTGTGG CTGGTCTTAA GATCATCCGT GCTCAAGTTC CACTATCTGA GATGTTTGGT
TACGCAACGG ACCTACGTTC TGCAACTCAA GGCCGTGCGT CTTACTCTAT GGAGTTTAAC
GAGTACGCTG AAGTACCGAA AAACTTCGCA GATAAAATCA TTGCAGACCG TGGTTACTAA
|
|---|
| Protein sequence | MARKTPIERY RNIGICAHVD AGKTTTTERI LFYTGLSHKI GEVHDGAATM DWMEQEQERG
ITITSAATTT FWRGMEAQFQ EHRVNIIDTP GHVDFTIEVE RSLRVLDGAV VVFCGSSGVE
PQSETVWRQA DKYHVPRMVF VNKMDRAGAD FLRVVDQIKN RLGANPVPIQ LNVGAEDDFR
GVIDLIKMKM INWNEADQGM SFTYDEIPAD MQELAEEWRN NLVEAAAEAT EELMDKYLEE
GELSEAEIKQ ALRTRTLNNE IVLATCGSAF KNKGVQAVLD AVIEFLPSPV DVPAIKGIDE
KENEVERHAD DNEPFSALAF KIATDPFVGT LTFMRVYSGV VNSGDAVYNS VKDKKERFGR
IVQMHANKRE EVKEVRAGDI AAAIGLKDVT TGDTLCDQNH KVILERMEFP EPVIQIAVEP
RSKADQEKMG IALGKLAAED PSFRVETDDE TGQTLISGMG ELHLDIIVDR MKREFSVDCN
VGKPQVAYRE TIRGKAEVEG KFVRQSGGRG QYGHVWITLE PSEPGEGFVF VDEIVGGVVP
KEYISSVSKG IEEQMNSGVL AGYPVLDIKA TLFDGSYHDV DSSEMAFKIA GSMAFKKGAL
EAQPVILEPM MNVEVTTPED WMGDVVGDLN RRRGMIEGMD EGVAGLKIIR AQVPLSEMFG
YATDLRSATQ GRASYSMEFN EYAEVPKNFA DKIIADRGY
|
|---|
| |