Gene VIBHAR_00047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00047 
SymbolmetF 
ID5555063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp47911 
End bp48813 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content48% 
IMG OID640905543 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001443334 
Protein GI156972427 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATACA CGCATGCAGG GCACATCGAT GCCTTAAACC AGAATATCGC TGAACTATCA 
GACAATATCA ACGTCTCATT CGAGTTTTTT CCGCCAAGCA GTGAGAAGAT GGAAGAAACG 
CTGTGGAACT CAGTGCATCG TCTTAAAACT CTTCAACCAA AATTCGTTTC TGTTACGTAC 
GGTGCCAACT CAGGTGAACG TGATAGAACT CACTCGATCA TTAAAGAAAT CAAAGCGGCG 
ACGGGTCTTG TGGCTGCGCC TCACCTAACC TGTATTGATG CAACTCGTGA TGAGCTGATC 
GACATTGCAG ATGATTACTG GAATAACGGT ATCAAGAACA TCGTTACTCT ACGTGGTGAT 
ATTCCACCGG GTGGTGGCGC GCCAGATATG TATGCGTCGG ACTTGGTTGA ACTGCTGAAA 
GCACGCCATG ATTTCGATAT CTCTGTAGCG GCATTTCCAG AAGTACACCC AGAGGCGAAA 
AGTGCGCAAT CGGATCTACT GAATCTAAAG CGTAAAGTCG ACGCAGGTGC AAACCGCGCG 
ATTACTCAGT TCTTCTTTGA TGTGGAGTCT TACCTGCGTT TCCGTGACCG CTGTGTCGCG 
GCTGGAATCG ACGTAGAAAT CGTTCCGGGT ATCTTACCTG TTTCGAACTT CAAGCAAGCT 
TCTCGCTTTG CGGCACAGAA CAATGTGAAA GTGCCAGGTT GGATGAGCAA GCAGTTTGAA 
GGCTTGGATG ATGATCCAGT GACGCGTCAG CTGGTCGGTG CAAGCCAAGC GATTGATATG 
GTGCGTGTAC TAAGCCGTGA AGGTGTGAAA GATTTCCACT TTTACACCCT GAATCGTGCG 
GAAATGACCT ATGCGCTATG CCACACTCTA GGTGTTCGTC CACAAGTTGC AGTCGGTGCT 
TAA
 
Protein sequence
MGYTHAGHID ALNQNIAELS DNINVSFEFF PPSSEKMEET LWNSVHRLKT LQPKFVSVTY 
GANSGERDRT HSIIKEIKAA TGLVAAPHLT CIDATRDELI DIADDYWNNG IKNIVTLRGD 
IPPGGGAPDM YASDLVELLK ARHDFDISVA AFPEVHPEAK SAQSDLLNLK RKVDAGANRA 
ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVSNFKQA SRFAAQNNVK VPGWMSKQFE 
GLDDDPVTRQ LVGASQAIDM VRVLSREGVK DFHFYTLNRA EMTYALCHTL GVRPQVAVGA