Gene VIBHAR_00040 details

Gene Information

• Locus tag: VIBHAR_00040
• ID: 5555388
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 37419
• End bp: 39293
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640905536
• Product: bifunctional argininosuccinate lyase/N-acetylglutamate synthase
• Protein accession: YP_001443327
• Protein GI: 156972420
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0165] Argininosuccinate lyase; [COG1246] N-acetylglutamate synthase and related acetyltransferases
• TIGRFAM ID: [TIGR00838] argininosuccinate lyase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAT GGGGCGGAAG ATTTACCCAA GCGGCAGACA CCAGATTTAA AGACTTCAAC 
GATTCATTGC GTTTCGATTA CCGATTGGCT GAGCAAGACA TCGTAGGCTC AATTGCGTGG 
TCTAAAGCAT TGCTTTCTGT TGACGTGTTA TCTGCAGAAG AACAACAAAA GCTTGAGCTG 
GCACTGAATG AGCTCAAGCT GGAAGTGATG GAAGACCCAC ATCAAATCTT GCGCTCAGAT 
GCGGAAGATA TCCACTCTTG GGTAGAGCAG CAACTGATCA ACAAGGTCGG CGACCTAGGT 
AAAAAGCTAC ACACGGGCCG TTCTCGTAAT GACCAAGTAG CAACCGACCT TAAACTTTGG 
TGTCGCCAGC AAGGTCAGCA ATTGTTAATT GCGCTTGATC GCTTACAAAC TCAGATGGTT 
GGCGTTGCCA AGCAACATCA AGGTACCGTT CTTCCGGGTT ACACTCACTT GCAACGTGCT 
CAACCTGTGA CGTTTGCGCA CTGGTGTTTG GCTTACGTGG AAATGTTTGA ACGTGATTAC 
TCACGTTTGA GTGATGCCCT TAAGCGTTTG GATACTTGTC CGCTTGGATC GGGTGCGCTT 
GCTGGTACCG CTTATCCAAT CGATCGTGAA GAGTTGGCTC ATAACCTTGG TTTCCATCGT 
GCAACACGTA ACTCGTTGGA CTCTGTATCT GACCGTGACC ACGTGATGGA ATTGATGTCT 
GTGGCGTCTA TCTCGATGTT GCACCTATCT CGCTTGGCAG AAGACATGAT CTTCTACAAC 
TCGGGTGAGT CTAACTTTAT TGAATTAGCC GATACGGTGA CGTCAGGTTC TTCTCTGATG 
CCACAGAAGA AAAACCCAGA TGCCCTAGAG CTTATTCGTG GTAAGACAGG CCGTGTATAC 
GGTGCGCTTG CAGGTATGAT GATGACAGTG AAAGCGCTGC CGCTGGCTTA CAACAAAGAC 
ATGCAGGAAG ACAAAGAAGG CCTGTTCGAT GCACTTGATA CATGGAACGA CTGCATGGAA 
ATGGCTGCAC TGTGTTTTGA TGGCATCAAG GTTAATGGTG AGCGCACGCT AGAAGCGGCG 
AAACAAGGTT ACGCAAACTC TACCGAACTG GCTGACTACC TAGTAGCGAA AGGTATCCCA 
TTCCGTGAAG CGCACCATAT CGTTGGTGTT GCTGTAGTTG GTGCGATTGC CAAAGGCTGT 
GCACTAGAAG AGTTGTCAAT TGATGAGCTG AAAGCCTTCT CTGAAGTGAT TGAAGCGGAT 
GTGTATGACA TCTTAACCAT CGACTCGTGT CTTGAGAAAC GTTGTGCACT AGGTGGTGTG 
TCTCCTCAAC AAGTGGCTTC CGCTGTTGAC CAAGCAGACA AGCGTCTATT TCAACGCGAT 
ACATCAGCCG TCAACGTTCG CCCTGCTCGC TTAACGGACA TCAAAACGTT AGAAGGCATG 
GTGGCATACT GGGCAAACAT GGGTGAAAAC TTACCACGCT CACGTAATGA GTTGGTACGT 
GATATTGGCT CCTTCGCGGT TGCCGAGCAC CACGGAGAAG TAACCGGATG TGCATCTTTG 
TATGTCTATG ACTCAGGGTT GGCAGAGATT CGCTCTCTCG GTATTGAAGC CGGTTGGCAA 
GGCCAAGGGC AGGGCAGTGC GATTGTGAAC TATCTGGTTG AGAAAGCGCG CCAAATGGCC 
ATCAAGAAAG TCTTTGTGCT GACACGTACG CCAGAGTTCT TTATGAAGCA AAGCTTCTTG 
CCTACGTCGA AGTCATTGCT GCCTGAGAAA GTACTGAAAG ATTGCGATCA GTGTCCACGT 
CAGCATGCAT GTGATGAAGT TGCACTGGAG ATCAACTTGT TCGAACAATT GATCCAGAAA 
AGTAACGTAG CCTAG 

 

Protein sequence

MALWGGRFTQ AADTRFKDFN DSLRFDYRLA EQDIVGSIAW SKALLSVDVL SAEEQQKLEL 
ALNELKLEVM EDPHQILRSD AEDIHSWVEQ QLINKVGDLG KKLHTGRSRN DQVATDLKLW 
CRQQGQQLLI ALDRLQTQMV GVAKQHQGTV LPGYTHLQRA QPVTFAHWCL AYVEMFERDY 
SRLSDALKRL DTCPLGSGAL AGTAYPIDRE ELAHNLGFHR ATRNSLDSVS DRDHVMELMS 
VASISMLHLS RLAEDMIFYN SGESNFIELA DTVTSGSSLM PQKKNPDALE LIRGKTGRVY 
GALAGMMMTV KALPLAYNKD MQEDKEGLFD ALDTWNDCME MAALCFDGIK VNGERTLEAA 
KQGYANSTEL ADYLVAKGIP FREAHHIVGV AVVGAIAKGC ALEELSIDEL KAFSEVIEAD 
VYDILTIDSC LEKRCALGGV SPQQVASAVD QADKRLFQRD TSAVNVRPAR LTDIKTLEGM 
VAYWANMGEN LPRSRNELVR DIGSFAVAEH HGEVTGCASL YVYDSGLAEI RSLGIEAGWQ 
GQGQGSAIVN YLVEKARQMA IKKVFVLTRT PEFFMKQSFL PTSKSLLPEK VLKDCDQCPR 
QHACDEVALE INLFEQLIQK SNVA