Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00033 |
Symbol | |
ID | 5555869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 29250 |
End bp | 30353 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640905529 |
Product | fimbrial assembly protein PilM |
Protein accession | YP_001443320 |
Protein GI | 156972413 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATGCTA ATAACAACCT TTGCACGAAG AAAATTCTCT GGGTGCTAAC AACATCGGCA CGCAAGAATT TCGGAGCGAG AGTAGAGATG GATAAGCTAT TAGTTACGGG CATAGATATT GGCCATCACA GCCTCAAAGC CGTGGTACTT AAACCCAATG GCAACAGTTA CGCACTACTG GGTTACAAAG AAATAATACT TAAGGAAGGT ATTGTCGCTG AAAATAACAC CATAAATCAT CAAGAAATTG TAAAGACCCT TAAAGAGATG AAAAAAGAGC TACCTTTTCG GGCTCGAAAG GTCGCAATTT CAGTTCCAGA TAATGCTGTG ATCAGTAAAA AGCTGCAGAT AGAGCAGAAC TTAGAAGAGA GTGAAAAGGA GTTTGCTGTT GTGCAAGCCT TCTCACATCA ATCTCCATTC CCTGTGGAAG AGCTGAGTCT TGACTTCATC AAGGTTGATA CGGATGAGCA GATGCGAGGC ACTGACAGTT ATCAGGTCTT CGCGACTCGT AAAGACGTGG TAGAAACCCG AGTTGAGGCA TTGCAGAAAT CAGGCTTGAA ACCAGTACTG GTGGACGTGC ACTCACAAAG TCTTGGTCAT ATGTGGAAAT TGGTTGCGGA ACGTTTTCCT GAAAAGAACA AGTATTGTTT ACTGGACATT GGTTCTTTGA ACAGTTCTTT CACTATGTTC ACCGAACAAG GTGAATTGTT TCATAAAGAA TTTCCCTGCG GTACTCGCAC TACGGGCAGT TTGTTTCAAC AAGATCCATT AGCAGACGAC GCACAAGTGG CAACGGAGCA ATTTAATCGA CAAATCGTTG AGCGTGTTAA ACGTCAGATG CAGCTCTATA CCTCAATTAA TGGAAGCCAA GATATCAAAG GCGTTTGGCT TTCGGGAGAG GGCGCTGCAA CACCTATGTT GGCCGAGGAG CTGTCTAGCC AGTTGGCACT AGAGTGTGAA CTGCTTAATC CACTTGGTTT GTTTGAAATG AAGGTGTCTA AACGCAAACG TCGTGCCGCG GATTGGCAAC ACTTCACTGC TGCAGCCGGA CTGGCTGTAC GTGGTATTCA GTGGCTAGGA GGTGACAATG CTGTATCACA TTAA
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Protein sequence | MDANNNLCTK KILWVLTTSA RKNFGARVEM DKLLVTGIDI GHHSLKAVVL KPNGNSYALL GYKEIILKEG IVAENNTINH QEIVKTLKEM KKELPFRARK VAISVPDNAV ISKKLQIEQN LEESEKEFAV VQAFSHQSPF PVEELSLDFI KVDTDEQMRG TDSYQVFATR KDVVETRVEA LQKSGLKPVL VDVHSQSLGH MWKLVAERFP EKNKYCLLDI GSLNSSFTMF TEQGELFHKE FPCGTRTTGS LFQQDPLADD AQVATEQFNR QIVERVKRQM QLYTSINGSQ DIKGVWLSGE GAATPMLAEE LSSQLALECE LLNPLGLFEM KVSKRKRRAA DWQHFTAAAG LAVRGIQWLG GDNAVSH
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