Gene VIBHAR_00031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00031 
Symbol 
ID5555965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp28105 
End bp28698 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content45% 
IMG OID640905527 
Productfimbrial assembly protein PilO 
Protein accessionYP_001443318 
Protein GI156972411 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAATT GGCAAGACCT AGAAATGGAT GAAATCGCTG AATGGCCGCT GCTGCCTCAG 
TTGGTAGCGA TTCTTCTTAT GGTAGTGTTG ATTCAAGGTT TTGGTTACTG GTTTTATTTG 
AAGCCAGAGG AAGCTCGCCT TAATACCTTG ATCCAAGAAG AGCAGACTTT AAAAGTCGCA 
CTGAGGATCA AAGCCAATAA AGTCGCTGCA CTGCCGCAGC TTCAGTCACA ACTTGATGAA 
CTGACCACCC GCTATGAACT GCTTTTGCAA CAACTGCCTG CACAGAAAGA ATTGGCGACC 
ATGCTAGCGT CGGTTAATGA ACTCGGCATC GATAACAAGC TGACATTTAC GCGTATCGAT 
TGGGGAGATA AAGAGTCAGA GCACTTCCTT TACCGTTTGC CACTCAATAT TGAGCTAACG 
GGTGACTTCC ATGACATAGG TCGTTTTTCA CAGGCCATCG CCACCTTACC ACGCATCATC 
ACATTTCAAG ATGTAACTTG GCAGCGAGTC AGTCAAGAGA GTGAAACCTT GCACTTCCGT 
GTAAGAGCAA ACACTTACCA ATTCAAACCA GAGGAAAAGA AAGATGCGAA ATAA
 
Protein sequence
MVNWQDLEMD EIAEWPLLPQ LVAILLMVVL IQGFGYWFYL KPEEARLNTL IQEEQTLKVA 
LRIKANKVAA LPQLQSQLDE LTTRYELLLQ QLPAQKELAT MLASVNELGI DNKLTFTRID 
WGDKESEHFL YRLPLNIELT GDFHDIGRFS QAIATLPRII TFQDVTWQRV SQESETLHFR 
VRANTYQFKP EEKKDAK