Gene VIBHAR_00028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00028 
SymbolaroK 
ID5556113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp25110 
End bp25628 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content47% 
IMG OID640905524 
Productshikimate kinase I 
Protein accessionYP_001443315 
Protein GI156972408 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGA AACGTAATAT TTTCCTTGTT GGCCCAATGG GCGCCGGCAA AAGTACAATT 
GGTAGACACC TAGCACAGCA ACTGCATATG GAGTTCGTGG ACTCTGATAC AGTGATCGAA 
GAACGCACTG GTGCAGATAT CGCTTGGGTT TTTGATGTTG AAGGTGAAGA AGGCTTCCGC 
AAACGCGAAG AAGCTGTACT TGAAGACCTA ACTCAAGAGC AAGGCATCGT GCTAGCAACG 
GGCGGTGGCT CTGTTAAGAG CAAAGAAAAC CGCAACCGTC TTTCAGCACG TGGTGTTGTT 
GTTTACCTAG AAACAACTAT TGAAAAGCAA CTTGCTCGCA CAAACCGCGA CAAGAAGCGT 
CCTCTACTTC AAACTGACAA CCCTCGTGAA GTATTGGAAA GTTTGGCAGG CGAACGTAAC 
CCTCTATACG AAGAAGTAGC GGATTACACA GTTCGTACTG ACGATCAGAG TGCAAAAGTG 
GTAGCCAACC AGATCGTAAA AATGCTAGAA GAGAGATAA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRHLAQQLHM EFVDSDTVIE ERTGADIAWV FDVEGEEGFR 
KREEAVLEDL TQEQGIVLAT GGGSVKSKEN RNRLSARGVV VYLETTIEKQ LARTNRDKKR 
PLLQTDNPRE VLESLAGERN PLYEEVADYT VRTDDQSAKV VANQIVKMLE ER