Gene VIBHAR_00024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00024 
Symbol 
ID5554359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp20748 
End bp21419 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID640905520 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001443311 
Protein GI156972404 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATT TTCTAATTGC TCCATCCATT TTATCAGCTG ATTTTGCTCG TCTCGGTGAA 
GACGTAGAAA AAGTACTCGC AGCGGGTGCG GATGTGGTGC ACTTCGACGT TATGGACAAC 
CACTATGTAC CAAACCTGAC TTTTGGTGCG CCTGTGTGTA AAGCGCTACG TGATTACGGC 
ATCACAGCGC CAATCGATGT TCACCTGATG GTGAAGCCTG TTGATCGCAT CATCCCTGAT 
TTCGCCAAAG CTGGCGCATC GATGATTACT TTCCACATTG AAGCATCTGA GCACGTTGAC 
CGTACTCTTC AACTGATCAA AGAGCACGGC TGTAAAGCGG GTGTGGTTCT TAACCCAGCA 
ACACCACTTG CACACCTTGA ATTCATCATG GACAAAGTTG ACTTGATTCT ACTGATGTCT 
GTAAACCCTG GTTTCGGTGG TCAATCATTC ATTCCTCACA CGTTAGATAA GCTGCGTGCA 
GTACGTAAGA TGATCGACGA GTCTGGTCGC GATATCCGTC TAGAAATTGA TGGTGGCGTG 
AAGGTAGATA ACATCCGTGA AATCGCCGAA GCGGGTGCAG ATATGTTTGT AGCGGGCTCT 
GCGATTTTCA GTGAACCAGA TTACAAGCAA GTGATCGACA AAATGCGTGC TGAACTTGCA 
GAAGTAAAAT AA
 
Protein sequence
MKDFLIAPSI LSADFARLGE DVEKVLAAGA DVVHFDVMDN HYVPNLTFGA PVCKALRDYG 
ITAPIDVHLM VKPVDRIIPD FAKAGASMIT FHIEASEHVD RTLQLIKEHG CKAGVVLNPA 
TPLAHLEFIM DKVDLILLMS VNPGFGGQSF IPHTLDKLRA VRKMIDESGR DIRLEIDGGV 
KVDNIREIAE AGADMFVAGS AIFSEPDYKQ VIDKMRAELA EVK