Gene VIBHAR_00019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00019 
Symbol 
ID5553891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp18224 
End bp18988 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content45% 
IMG OID640905515 
Producthypothetical protein 
Protein accessionYP_001443306 
Protein GI156972399 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCCGAT ACTGGTTACT TGGCTTTAGC TTACTTTGCA CGGGAGCATC GTACGCTGAG 
GAGGCAGTAC AGCCAGAGCA AGAAATTGAA GTGCCCAATC CTCTGCAAAC TGAGGTCGAG
TTCGGCTATC AAGCTCACAC AGGTAACACG GACTCTCGTT CCCTGAATGC TCGTCTAAGT
GCTGAATACA CTTCTGGCCG CCACCGCTCT AACGGCGAAT GGAAGTACTA CAATCTTTAT
GAAGATGGAG AGGAAGACAA ACGCTCTTCA ACCTACAGCG TGCAAAGCGA CTATAAGTTA
GGACCAAAAA CCTACTTGTA CGGCAGCTTT AAAGGGGTTG ATTCACGCTA CAGTGCATAC
TTTAAAGATT ACACCCTTTC TGGCGGTTTG GGTTACCAGT TCGCGTATAC AGAGGAGTTT
ACTCTAGAAG TGGAACTAGG CCCTGGTTTT CGTTACCAAG AACCAAACTT AGACGAAATT
GACGAAGACG ACATCATCTT TCCAGACATC GTTCGAGAGG GGATCGTCCG TGGTAACATC
AATACCACAT GGAATCCTTT GGATAACTTA AGTCTCTCTG CCAATATCAC TTTAGTAGCC
GGCAAAAGCA ATACTCTTGT TGATAGCGAC CTGAGCGTAA CGAATAACAT CACTGAGGGT
ATAGCGTTAA AACTCACTCA TTCGCGCCAG TACCACAATA AAGTACCAAA TAATTTAAAC
AAGGCAGACA GCGTATTCGC GGTTAATTTA CTATTTCTTT TCTAA
 
Protein sequence
MSRYWLLGFS LLCTGASYAE EAVQPEQEIE VPNPLQTEVE FGYQAHTGNT DSRSLNARLS 
AEYTSGRHRS NGEWKYYNLY EDGEEDKRSS TYSVQSDYKL GPKTYLYGSF KGVDSRYSAY
FKDYTLSGGL GYQFAYTEEF TLEVELGPGF RYQEPNLDEI DEDDIIFPDI VREGIVRGNI
NTTWNPLDNL SLSANITLVA GKSNTLVDSD LSVTNNITEG IALKLTHSRQ YHNKVPNNLN
KADSVFAVNL LFLF