Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00017 |
Symbol | alr |
ID | 5553814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 15413 |
End bp | 16513 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640905513 |
Product | alanine racemase |
Protein accession | YP_001443304 |
Protein GI | 156972397 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGTA ATGCAATGAG CTACATGAAA GCCGCGATGG CATGCATTGA TTTGTCAGCA CTGCAGCACA ACTTACAACG AGTAAAACAA CAAGCACCAG ACAGCAAAGT GATGGCGGTG GTGAAGGCAA ATGGCTACGG TCATGGTCTT CGTCATGTAG CTAAACACGC TACGCATGCG GATGCCTTTG GCGTTGCTCG CATTGAAGAA GCGCTTCAGC TACGCGCGTG TGGTGTGGTG AAGCCGATTC TATTACTAGA AGGCTTTTAC TCACCTGGCG ACTTACCCGT ATTGGTGACC AATAACATTC AAACGGTTGT CCACTGTGAA GAGCAGTTGG TGGCATTAGA GCAAGCAGAA CTCGAAACGC CCGTTGTGGT TTGGCTCAAA ATCGATAGTG GCATGCACAG ACTTGGTGTG CGTCCAGAGC AGTACGATGA ATTCATTACA CGCCTGAAAG AGTGTCCAAA TGTGGCGAAA CCGCTGCGTT ACATGAGCCA CTTTGGTTGC GCTGATGAAC TGGATAACAG CATCACGACA GAGCAAATCG ACTTGTTTAT GTCGCTTACC GCTGGCTGTC AGGGCGAGCG TTCTTTGGCG GCGTCAGCAG GCTTGCTTGC TTGGCCACAA AGTCAGTTAG ATTGGGTTCG TCCGGGTATC ATTATGTACG GCGTGTCTCC ATTCAACGAT AAAACCGCGC AAGATATGGG TTACAAACCT GTTATGACAC TGAAGTCGCA CTTGATCGCA GTACGTGAAG TGAAAAAAGG CGAAAGTGTC GGTTACGGCG GCATGTGGAC CAGCGAGCGT GATACCAAAG TCGGCGTGAT TGCGGTGGGT TACGGTGATG GCTACCCACG TACAGCGCCA AATGGTACGC CTGTTCTGGT TAATGGACGC AAAGTACCAA TTGCAGGCCG TGTTTCTATG GATATGCTGA CGGTCGATTT AGGGCCAGAT GCGACTGATA AAGTAAGCGA TGAAGCGATT CTATGGGGCA AGGACTTACC GGTAGAAGAG GTAGCAAGCC ACATAGGCAC CATTGCTTAT GAGTTGGTGA CTAAACTGAC TTCTCGTGTC GAAATGGAAT ATTCGAAGTA A
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Protein sequence | MMSNAMSYMK AAMACIDLSA LQHNLQRVKQ QAPDSKVMAV VKANGYGHGL RHVAKHATHA DAFGVARIEE ALQLRACGVV KPILLLEGFY SPGDLPVLVT NNIQTVVHCE EQLVALEQAE LETPVVVWLK IDSGMHRLGV RPEQYDEFIT RLKECPNVAK PLRYMSHFGC ADELDNSITT EQIDLFMSLT AGCQGERSLA ASAGLLAWPQ SQLDWVRPGI IMYGVSPFND KTAQDMGYKP VMTLKSHLIA VREVKKGESV GYGGMWTSER DTKVGVIAVG YGDGYPRTAP NGTPVLVNGR KVPIAGRVSM DMLTVDLGPD ATDKVSDEAI LWGKDLPVEE VASHIGTIAY ELVTKLTSRV EMEYSK
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