Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_p08278 |
Symbol | |
ID | 5552780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009777 |
Strand | - |
Start bp | 88400 |
End bp | 88918 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640898155 |
Product | transposase |
Protein accession | YP_001436145 |
Protein GI | 156936794 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 72 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGGTTC AGGCGGATGA AACGCCGCTC AATGTCCTCA AAGAAGATAA ACAGTGTTAT ATGTGGCTCT ACTGCTCGGG CGCAGACTCG CCCGACGCTG CACTGCCGAA TGTGAAGAAT ATCGCCTTGT ACGACTATCA AAACAGTCGC GCGAGGGCAT GCCCTGTTGC CTTCTTGGGG AATTACAGTG GTTATCTGCA AACCGATGGC TATGGTGCCT ATGATGGTCT TCATCACGTA ACCAATGTTG GTTGCTTGGC GCATGCACGG CGTAAGTTCA TGGATGCTAA GAAGCTTCAA GGTAAAGGTA AGTCAGGCAA AGCAGATAAA GCGCTGGCCA AAATCCAGAA GCTCTATGGG ATAGAATCGC GCTTAAAAGG TGCGACTGTC GAAACACGAA AAGCAGAACG TCAACAGCAT GCCAAGCCGA TACTGGATGA GCTGCACGAC TGGATGACGT CTCAACAAGT AATAAGCTCT ATACCGAATC AACTTGAAGA TGCAGGCTTG AGAACCTGA
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Protein sequence | MVVQADETPL NVLKEDKQCY MWLYCSGADS PDAALPNVKN IALYDYQNSR ARACPVAFLG NYSGYLQTDG YGAYDGLHHV TNVGCLAHAR RKFMDAKKLQ GKGKSGKADK ALAKIQKLYG IESRLKGATV ETRKAERQQH AKPILDELHD WMTSQQVISS IPNQLEDAGL RT
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