Gene VIBHAR_p08278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08278 
Symbol 
ID5552780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand
Start bp88400 
End bp88918 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content49% 
IMG OID640898155 
Producttransposase 
Protein accessionYP_001436145 
Protein GI156936794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGTTC AGGCGGATGA AACGCCGCTC AATGTCCTCA AAGAAGATAA ACAGTGTTAT 
ATGTGGCTCT ACTGCTCGGG CGCAGACTCG CCCGACGCTG CACTGCCGAA TGTGAAGAAT
ATCGCCTTGT ACGACTATCA AAACAGTCGC GCGAGGGCAT GCCCTGTTGC CTTCTTGGGG
AATTACAGTG GTTATCTGCA AACCGATGGC TATGGTGCCT ATGATGGTCT TCATCACGTA
ACCAATGTTG GTTGCTTGGC GCATGCACGG CGTAAGTTCA TGGATGCTAA GAAGCTTCAA
GGTAAAGGTA AGTCAGGCAA AGCAGATAAA GCGCTGGCCA AAATCCAGAA GCTCTATGGG
ATAGAATCGC GCTTAAAAGG TGCGACTGTC GAAACACGAA AAGCAGAACG TCAACAGCAT
GCCAAGCCGA TACTGGATGA GCTGCACGAC TGGATGACGT CTCAACAAGT AATAAGCTCT
ATACCGAATC AACTTGAAGA TGCAGGCTTG AGAACCTGA
 
Protein sequence
MVVQADETPL NVLKEDKQCY MWLYCSGADS PDAALPNVKN IALYDYQNSR ARACPVAFLG 
NYSGYLQTDG YGAYDGLHHV TNVGCLAHAR RKFMDAKKLQ GKGKSGKADK ALAKIQKLYG
IESRLKGATV ETRKAERQQH AKPILDELHD WMTSQQVISS IPNQLEDAGL RT