| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08274 |
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| Symbol | |
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| ID | 5552669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | + |
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| Start bp | 85311 |
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| End bp | 86780 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640898151 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001436141 |
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| Protein GI | 156936790 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 87 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCAA AAGAGATTAG TGCCTCTCCT GACAGTGCTC AGTGGCAATC CATAAATTGG
AAAGCCGTTG AATCCCATGT TTTAAAGCTT CAGATGCGTA TTGCAAAGGC AACACGAGAA
GGTAAACACG GCAAAGCGAA AGCATTGCAG TGGATACTGA CTCACTCGCG CTCAGCAAAA
CTTCTTGCTG TTAAGCGGGT ATCACAAAAT AAAGGCAGTA AAACGCCTGG AATTGACGGC
GTTATCTGGA ATACAGATAC GCGCCGCATG AAAGCAGTCA ATCAATTGAG CAGAAAAGCT
TATCTAGCCA AACCGCTCAA GCGTATCTAC ATCCCCAAGA AAAACGGCAA ACTCAGACCA
CTGGGTATCC CCTGTATGGT CGATAGAGCG CAGCAAGCGC TTCATCTTCT TGCACTAGAG
CCAGTATCAG AAACACTTGC CGATCCTAAC AGCTATGGAT TTAGACCAAA TCGAAGCACT
GCTGATGCTA TCGCGCAGTG CTTCAAGTGT CTGGCACTAA AGAAATCAGC TCAGTGGGTA
CTTGAGGGAG ACATCAAAGC CTGTTTCGAC AAGATTGGGC ATCAATGGCT TATGAACAAC
ATTGCCGTGG ATAAACGCAT GTTGGAACAA TGGTTAAAGT CTGGTTTTAT GGACAAAGGG
CTGTTCTATC GTACAGATGA GGGAACACCT CAAGGCGGGG TTATATCCCC CACCTTGATG
CTAATGACCC TTGCAGGAAT TGAGCAGCGC ATAAAGTCTA CCGCTCTCAA AAAGGGGGCA
AGAGCTAACT TTATTGGATA CGCCGACGAT TTCGTCGTCA CCTGTGCTTC AAAGGAAGTG
CTGGAGAACG ATATCAAACC GTTGATTGCT GATTTCTTAG CAGAAAGAGG CTTAACACTC
TCCGAAGAGA AAACGCACAT TACTCATATC AGTCGTGGTT TTGATTTCCT AGGTTTTAAC
CATAGGAAGT ACAAAGGAAA ATTGCTCATT AAACCGAGTA AATCCAACAC ACTGTTGTTC
TTGGGTAACT TGCGCGAACT CATCAAAAAG CACGCAACTA TCCCCGTCAA CGATTTAATC
AAATTGATAA ATCCGAAACT ACGGGGCTGG TCGAATTACT ATCGACACTG CGTGGCCAAA
CAGGTATTCG GATATGTAGG TCACAAGCTA TTCCATACGC TATGGTACTG GGCTAAAAGG
CGTCATCCAA CCAAATCGAG AACTTGGATC GCTCTTAAGT ACTTCATCAA CCGTCAAGGC
CAATGGCAAT TTCACGATTG GCAGAAGATC ATGAATATGG ATTGTCAGTT CAATCTGTTT
CAAATAGCCA AGGTGCCAAT AGAGAGACAT GTGAAAATCA GGAGTGCCGC AACGCCTTTT
GACCCTCAAT ACCAAGAATA CTTGGCAAAG AGAAAGTCAA AAAGGCAATG TCGTAACTCT
TGGCATGAGC CTGCTCTCGC TGCTTTATAA
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| Protein sequence | MISKEISASP DSAQWQSINW KAVESHVLKL QMRIAKATRE GKHGKAKALQ WILTHSRSAK
LLAVKRVSQN KGSKTPGIDG VIWNTDTRRM KAVNQLSRKA YLAKPLKRIY IPKKNGKLRP
LGIPCMVDRA QQALHLLALE PVSETLADPN SYGFRPNRST ADAIAQCFKC LALKKSAQWV
LEGDIKACFD KIGHQWLMNN IAVDKRMLEQ WLKSGFMDKG LFYRTDEGTP QGGVISPTLM
LMTLAGIEQR IKSTALKKGA RANFIGYADD FVVTCASKEV LENDIKPLIA DFLAERGLTL
SEEKTHITHI SRGFDFLGFN HRKYKGKLLI KPSKSNTLLF LGNLRELIKK HATIPVNDLI
KLINPKLRGW SNYYRHCVAK QVFGYVGHKL FHTLWYWAKR RHPTKSRTWI ALKYFINRQG
QWQFHDWQKI MNMDCQFNLF QIAKVPIERH VKIRSAATPF DPQYQEYLAK RKSKRQCRNS
WHEPALAAL
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