| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08267 |
|---|
| Symbol | |
|---|
| ID | 5552738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009777 |
|---|
| Strand | - |
|---|
| Start bp | 79747 |
|---|
| End bp | 80946 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640898144 |
|---|
| Product | plasmid partition protein ParA |
|---|
| Protein accession | YP_001436134 |
|---|
| Protein GI | 156936783 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 78 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTC AACAAACCAC GTCACACCTT CAATCCCTTA AGCAAGGAGC CGATGCTTAC
ATTAAGCGCC GCAACCAGCG CTTACTGGCG AATCATCGCA AAGAGTTACG CAATTTTACC
CGTGCAGAAG CCTCCGCTTA CTTAGGCATC GATGCTAAAA CGCTGGATAA ATATGTAACC
GCTGCGGAGA TTGATCCTCG TCGTCATGAA GACTCTCAGT GGTCGATTGA TATTGCGGAA
ATGTACCGTG TACGTGACTT GTTGCCAGAG GCATTACGTA AAGAGCCAAA GTTCTCGCGT
AGCGAACAAC AATCAGCGCA AGTCATCGTT ATTCAAAACC AGAAAGGTGG CGTTGGTAAA
ACTGTGTCTG CCGCGACTGT CGCATCTGGT TTAGCTACAG AGTTCCATCA AGAGTACCGT
GTAGGCTTAA TAGATATGGA TGGCCAGGCG ACCCTCTCTA TGTATTACGC GCCAGAGGCA
GACCAGGAAG GCAACTTGTC TGTGGGTGAT CTCATTATGC GTAACTTTGA CTTGGATGAG
GATGAAACGT TTGAGCAAGC AGTATCTGAG GCGTTCCTAG AAACCACCAT TCCTAACTTA
CGAATTCTGC CAGCAGCGCA GAGTGACCGA GCTATTGAAG GCTGGTTCCA TGAACAAGTC
TTCAGCCATA AATTGCCATC CCCCTACTCT ATCTTGGCTG AGATCATCGA TGCTGTGAAA
GATGAATTCG ACATCATCAT CATCGATACA CCGCCATCAC TAGGTTACGC CACTTACAAC
GCCTACTTTG CCGCAACGAG TGTGGTATTC CCGCTGTCGA TTACGGAGAA CGACATCGAT
GCGACCTGTT CATACTTCAG CTACATTCCG CAAGTATGGG CGCTGCTAGC CAATGCGAAT
CATGATGGGT ACGACTTCAT GAAGATCTTG CTTACCAACC ATCGTGACAG CTCGACCACA
ACTGAGTTGA TGAACAGTCT TTACGACCAC TTTGCACCTT ATTTGTACTC TAAGGAGTTC
AAACACAGCG AAGCCATCAG ACAAGCTTCT TCCCTACTTT CAACCGTTTT TGATATGTCA
AAGAGCGAGT ACCCAAAAAG TAAGTCGACG TTCCAAACGG CGCAGCAAAA CGGGTATGAG
GTAACCAGTC AAATTCAGCG CGACATTCTT AATGTGTGGC GCGAACAGGA GCAAGCATAA
|
|---|
| Protein sequence | MDTQQTTSHL QSLKQGADAY IKRRNQRLLA NHRKELRNFT RAEASAYLGI DAKTLDKYVT
AAEIDPRRHE DSQWSIDIAE MYRVRDLLPE ALRKEPKFSR SEQQSAQVIV IQNQKGGVGK
TVSAATVASG LATEFHQEYR VGLIDMDGQA TLSMYYAPEA DQEGNLSVGD LIMRNFDLDE
DETFEQAVSE AFLETTIPNL RILPAAQSDR AIEGWFHEQV FSHKLPSPYS ILAEIIDAVK
DEFDIIIIDT PPSLGYATYN AYFAATSVVF PLSITENDID ATCSYFSYIP QVWALLANAN
HDGYDFMKIL LTNHRDSSTT TELMNSLYDH FAPYLYSKEF KHSEAIRQAS SLLSTVFDMS
KSEYPKSKST FQTAQQNGYE VTSQIQRDIL NVWREQEQA
|
|---|
| |