| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08237 |
|---|
| Symbol | |
|---|
| ID | 5552698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009777 |
|---|
| Strand | - |
|---|
| Start bp | 57054 |
|---|
| End bp | 57407 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640898114 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001436104 |
|---|
| Protein GI | 156936753 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 0.143502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA TGCTCAGCGC ACCAGAGATT TATCTGTATC GTGAGAGTGT CGATTTTAGA
AAGTCCATCA ATGGCCTCGC GGCGATTATC GAAAGTGACA CCGATTTACC CTTGGGAAGC
GGCGCACTGT TCCTGTTCAC CAATAAACAG CGCGACAAAA TCAAAGTGCT GTACTGGGAT
AAAACTGGCT TTGCGCTTTG GTATAAACGC CTTGAAAAAG CCAAGTATAA ATGGCCTGCA
AAAGAGCAAA ATGAAGTGTT TACCCTGACT CAATTCGAGC TTGATAGACT GCTTTCTGGC
TTCACGATTA TCGGCCATAA ACCCGTTCAA ATAAACGATT TTACAATGAC TTAA
|
|---|
| Protein sequence | MKHMLSAPEI YLYRESVDFR KSINGLAAII ESDTDLPLGS GALFLFTNKQ RDKIKVLYWD
KTGFALWYKR LEKAKYKWPA KEQNEVFTLT QFELDRLLSG FTIIGHKPVQ INDFTMT
|
|---|
| |