| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08236 |
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| Symbol | |
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| ID | 5552699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | - |
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| Start bp | 55450 |
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| End bp | 56994 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640898113 |
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| Product | transposase |
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| Protein accession | YP_001436103 |
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| Protein GI | 156936752 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.0445015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CGCCAGTTAT CAACCCAGAA AGCCAAGATG TTGCCAAGCT ACAAGCGATG
GTGAAAGCCC TTCTGCTCTC TCAGGAGCGG AAGGAGTCTC AATGGAAACA AGAGCGTCAA
TCCTTACTCG AACAGCTCAA GCTGGCCTTC GACCGTCAGT TCGCGAAACG CTCCGAGGCG
CTAAAGCCTT ACGATGAATC TCAAGGTGAC CTCTTCAACG AAGTGGAATG TGAAGCCGCT
AAGGAAGAAG AGGTTGAAGT GGTCACGACG ACCACTACAA CGAAGAAGCG TGGTAAACGC
AAGCCCCTTC CAAAGACTTT GCCTCGTGAG GTTATCGAAC TCGATTTAGA CGACCATGAA
AAACAGTGTG CCTGCTGCCA ACATAGTCTG CATAAAATCG GTGAAGACCG CAGTGAGAAA
CTTGAGTTCT CACCAGCTGT GCTCAAAGTG CTGGAATATG TTCGTCCTAA GTATGCTTGT
CGTCAGTGCG AGCAAACTGA AGACAACAGC CACATCGTTC AAAAACCAGC GCCCCAGAGC
ATCATCCCTA AAAGCTTCGC GACAGAAAGC TTGCTGGCCA ATATCATCCT TGGTAAATAT
CAATACGCAA TGCCCCTTTA CCGCCAAGAG TCGCTGTTTA CTCAGTCGGG TATTGAGCTA
TCGCGAACTA CCATGGCAAG GTGGGTTATC CAAGTCAGTG AGAAGTTCAA ACCCCTCTAT
GCCGCCTTAA AAGCGCATCT ACTTCAACAA GTGGTGGTTC AGGCGGATGA AACGCCGCTC
AATGTCCTTA AAGAAGATAA AAAGTGTTAT ATGTGGCTCT ACTGCTCGGG CGCAGACTCG
CCCGACGCTG CACTGCCGAA TGTAAAGAAT ATCGCCTTGT ACGACTATCA AAACAGTCGC
GCGAGGGTAT GCCCTGTTGC CTTCTTGGGG GATTACAGTG GTTATCTGCA AACCGATGGC
TATGGTGCCT ATGATGGTCT TCATCACGTA ACCAATGTGG GTTGCTTGGC GCATGCACGG
CGTAAGTTCA TGGATGCTAA GAAGCTTCAA GGTAAAGGTA AGTCAGGCAA AGCAGATAAA
GCGCTGGCCA AAATCCAGAA GCTCTATGGG ATAGAATCGC GCTTAAAAGG TGCGACTGTC
GAAACACGAA AAGCAGAACG TCAACAGCAT GCCAAGCCGA TACTGGATGA GCTGCACGAC
TGGATGACGT CTCAACAAGT AATAAGCTCT AGTCCATTAG GAAAAGCGAT TAAGTATACG
CTCGGCCAAT GGCCCAAGCT CATCCGCTAT ATCGATGACG GTCATTTATC TATCGATAAT
AATCGTGCTG AACGCGCCAT TAAACCGCTG GTCATTGGCA GAAAAAATTG GCTGTTCTCA
AACACACCAA ATGGTGCTGA TGCGAGCGCG ATGCTTTACA GCATCGTCGA GACAGCGAAA
GCCAACGGCC TTATCCTCTA CGACTACATG GTCAAGTGCA TGAAAGAGCT CGCGAAAGCT
GAGCCTGATA TCGATGCGCT CCTACCTTGG AACTTCAAAC ATTAA
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| Protein sequence | MKKTPVINPE SQDVAKLQAM VKALLLSQER KESQWKQERQ SLLEQLKLAF DRQFAKRSEA
LKPYDESQGD LFNEVECEAA KEEEVEVVTT TTTTKKRGKR KPLPKTLPRE VIELDLDDHE
KQCACCQHSL HKIGEDRSEK LEFSPAVLKV LEYVRPKYAC RQCEQTEDNS HIVQKPAPQS
IIPKSFATES LLANIILGKY QYAMPLYRQE SLFTQSGIEL SRTTMARWVI QVSEKFKPLY
AALKAHLLQQ VVVQADETPL NVLKEDKKCY MWLYCSGADS PDAALPNVKN IALYDYQNSR
ARVCPVAFLG DYSGYLQTDG YGAYDGLHHV TNVGCLAHAR RKFMDAKKLQ GKGKSGKADK
ALAKIQKLYG IESRLKGATV ETRKAERQQH AKPILDELHD WMTSQQVISS SPLGKAIKYT
LGQWPKLIRY IDDGHLSIDN NRAERAIKPL VIGRKNWLFS NTPNGADASA MLYSIVETAK
ANGLILYDYM VKCMKELAKA EPDIDALLPW NFKH
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