Gene VIBHAR_p08220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08220 
Symbol 
ID5552715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand+ 
Start bp45337 
End bp45927 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content40% 
IMG OID640898097 
ProductDNA-binding protein RDGA 
Protein accessionYP_001436087 
Protein GI156936736 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC TGGGTCAACG CTTAGAAGAA TTAAGAGTTA ATAACAGACT TACTAAAAAA 
GATGTTGGAC ATGTTGCAGG GGTAACTGGC ACAACTGTCG ACAAATGGGA AAAAGATTTA 
ATAATACCTA GAGATGCTAA GCTCAAACGT TTAGCTGAAC ATTACAATGT TAGTTTCGAA 
TGGTTGCGAG TTGGTGTTGA CGGAGCAAAA GTGACACCAG TTCCTGAGAG TTTTGCGGTA 
TCGATTCAAT CTTATAAAGA AGGCGATGAA TCTGTATTTT TTGATGCTCG ACTGCTCCCT 
TCAGGTCACA GCGAGCGACT AGTGTATGTT CAGGTTGAAG GGCACAGCAT GGGGGATATA 
CTTCCAGACG GAAGTAAGTT GATTGTCGAT CTTGAAGACC GACATTATAA AGACGACAAA 
CTCTACGTTT TCAAAACTCA AGATTTCATG TCTATCCGCA GGTTATCATT CACATCAACC 
GGTGTTAGGT TGCAATCTTT AGGTAGTCAG AAAGACGAAG TTCTTACTTT TCAACAGCTT 
TCTAAGGTAG ATGTTTTAGG GCGTGTTATA TCTTCGATTT GTCCGCGATA A
 
Protein sequence
MKTLGQRLEE LRVNNRLTKK DVGHVAGVTG TTVDKWEKDL IIPRDAKLKR LAEHYNVSFE 
WLRVGVDGAK VTPVPESFAV SIQSYKEGDE SVFFDARLLP SGHSERLVYV QVEGHSMGDI 
LPDGSKLIVD LEDRHYKDDK LYVFKTQDFM SIRRLSFTST GVRLQSLGSQ KDEVLTFQQL 
SKVDVLGRVI SSICPR