Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_p08215 |
Symbol | |
ID | 5552720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009777 |
Strand | - |
Start bp | 43059 |
End bp | 43376 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640898092 |
Product | conjugal transfer prepropilin |
Protein accession | YP_001436082 |
Protein GI | 156936731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 77 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAC TTAACTCAAA CACTCAAACA TACAGCAACC TAAAAGCGGC ATTCATCGCC ATGATGCTGG TTCTTGTTTG TCATCCAGCT ATCGCCGCAG GTGGCTTAGA TGAGGCAACG AACTGGGTAA ATGAAATCGC GGATTGGGCA TACAAACTCT TAGGTGCAGC TGTCTTTGTT TACAGTATCG TCATGGTCAT CTTGGCCTTG TTAGAGAAAA AAACATGGGG GGATGTGGGC ATCAGCATCG CTAAAGCGGC GGCCGCTGGC GGTATCGTTG CAGCGGTCAC TTACGCTTGG TCTATTTGGG GAAGCTAA
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Protein sequence | MKALNSNTQT YSNLKAAFIA MMLVLVCHPA IAAGGLDEAT NWVNEIADWA YKLLGAAVFV YSIVMVILAL LEKKTWGDVG ISIAKAAAAG GIVAAVTYAW SIWGS
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