Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_p08214 |
Symbol | |
ID | 5552721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009777 |
Strand | - |
Start bp | 42685 |
End bp | 43056 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640898091 |
Product | conjugal transfer protein traD |
Protein accession | YP_001436081 |
Protein GI | 156936730 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACG AAGAACGAGA TCAATACGCC AGTTATAACT CACTGGCTCG CAAACCACTC ATGTTTGGCA TGCCTATCAT CCCTCTCATT ACAGGGATGT TGTTGATGCT ACTGACTGGT TGGCTTGGGC TGAGTTTCTT CGGAGTAAAA GGGCTGGTTT TTCCAGCCTT TATTGCTTTA GGGCTACTGT ATATCCGCGT TCGTAGCGAG GAAGACAGCC GAGCCATCGA TGAAATGAAA TGGGAGGCAA AAGGCTTCTT AACTCGCCTT CGCTGCCAGT CCAACACCAT TTCATTCACT TCTATCGATA ATCACCCATT CAGGAGAAAG CAACATGTCA GCGAATGGTT TAAAAACAAT ACCCCTGACT GA
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Protein sequence | MQDEERDQYA SYNSLARKPL MFGMPIIPLI TGMLLMLLTG WLGLSFFGVK GLVFPAFIAL GLLYIRVRSE EDSRAIDEMK WEAKGFLTRL RCQSNTISFT SIDNHPFRRK QHVSEWFKNN TPD
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