Gene VIBHAR_p08212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08212 
Symbol 
ID5552723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand- 
Start bp39724 
End bp40389 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content45% 
IMG OID640898089 
Productconjugal transfer protein TrbJ 
Protein accessionYP_001436079 
Protein GI156936728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAC GAACCACGCT TGCCCTATGC ATTACATTGG CATTGAACGC CTCAACACAA 
GCATCGGGTA TCCCCGTTGT TGACGTTGCA GGTATCACTC AAATGGTGGT TGATAGTGCG 
CAGCGAGCTC AAGAGTTTAC GCAGTCGATA AGCGAAGCTC GCAACCGACT CAATCAACTC 
AAAAGCCAAG CGGAGCATTA TAAGTCGATG GTTGAAGGCC ACTATGGATT CGAAGAAATT 
CTCAGTGACC CGAACTTAAA TGATGTGATC GACCTCAGTG CATACAGTGA TTTGTATGAC 
GCTGTTGATG ATATATCCGA CTTACGTTCT GAATTTGGCC TTTATTCCGA CGACCCCGTG 
ATACAGAGGC GCTACGATAT GCAACTGAAA CAACTTCGTT TTCAGGAAAT GCTTTATGAG 
CGCAGCACTG AACGCAACGA ACGAATGAGT CGTCTACTTA GTCAGTTTGG CAGCGCAACA 
ACGCCAGCGG CCAAAGAAGA CTTAGCGAAC AGCATCAACT TTGAAACCAT GCAGATGCAA 
AACGAGCAAC GCATGATGGA TTCAATGTCA GACATGCTGG AACGTCAAAA ACAAATTGAA 
CATTCGAAGC AACTTAATGA TAGCTATCAA AGATCAATGT ACGGCGATGG CATCACCTAC 
GAGTAA
 
Protein sequence
MLKRTTLALC ITLALNASTQ ASGIPVVDVA GITQMVVDSA QRAQEFTQSI SEARNRLNQL 
KSQAEHYKSM VEGHYGFEEI LSDPNLNDVI DLSAYSDLYD AVDDISDLRS EFGLYSDDPV 
IQRRYDMQLK QLRFQEMLYE RSTERNERMS RLLSQFGSAT TPAAKEDLAN SINFETMQMQ 
NEQRMMDSMS DMLERQKQIE HSKQLNDSYQ RSMYGDGITY E