| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08204 |
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| Symbol | |
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| ID | 5552731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | - |
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| Start bp | 34222 |
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| End bp | 35238 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640898081 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001436071 |
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| Protein GI | 156936720 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 0.291523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA TCGATAAAGC CGCAACGGTC AATCAATTAC TCAGCATGAC CGGACTGCGG
CACTACTTAG ACTTAGAAGG GCTCACCGAG ATAGCCATCA ATCGACCTAA CGAGGTGTGG
TTTGACCGTG GTAACGGTTG GGAGCGCGAC GCGCTGCCAA ACTTATCATT AAACATGTGC
AGCAATCTCG CGAAAGCGTT AGCCACTTTC GCGGGACTGA CCATTCCTCT CGGTGAAGCC
AACCCGGTCG CCTCAGTCAT TTTTCCTGAT GGCGAGCGCG GTCAAATTGC TATCCCCCCC
GCCACAGAAA ACGGCATTGT CAGCATGACC ATCCGAAAGC CTTCCCTCAC TCGATTTGCG
CTGTCGAGCT ACCAAGAAAG CGGTCGCTTC TCTGATTTTA GAGAAATGGA TGTGAACCGT
GTTGAATTAA CACCGGTTCA AGAGCAGCTT CTCACGCTCA AACAAAATGG CGATATGTCG
CAATTCTTTA GCATGGCAGT AAAGAGCAAG CTCAACATCT TGCTCGTTGG TGGTACTGGT
TCAGGTAAAA CCACCGTCAT GAAAGCGATG GTGGACGAAT ACCCCACCGA TAAGCGCCTC
TTCACCATTG AAGATGTGCA TGAGCTCGAC TTACCCAATC ATCCCAATCA CCTTCATCTG
TTTTACAAGC AAGGCGGCTT AACCCCGAAA CAAATCATCG AGTCGTGTAT GCGAATGAAA
CCCGACCACG TGTTGTTGGC CGAGCTGCGT GGGGATGAGG CATGGACGTA CCTTGAAATG
CTCAACACCG GACACGAAGG CTCAATCACC ACCATTCACG CCAACGACTG TTATTCCACA
CCCGCACGAC TGGCGGGATT AGTGAAACAA TCCGAAGTCG GCCAAACACT CGATTATCAC
CACATCATGC GAACCATTCG AACCAGCATC GATGTGATTG CCTTTTTCAA ACACACTCAC
CTCGTCGAAC TCTTTTACGA CCCCGTCGAG AAGAATCGAC TGTTAAGCGA GGGCTAA
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| Protein sequence | MNTIDKAATV NQLLSMTGLR HYLDLEGLTE IAINRPNEVW FDRGNGWERD ALPNLSLNMC
SNLAKALATF AGLTIPLGEA NPVASVIFPD GERGQIAIPP ATENGIVSMT IRKPSLTRFA
LSSYQESGRF SDFREMDVNR VELTPVQEQL LTLKQNGDMS QFFSMAVKSK LNILLVGGTG
SGKTTVMKAM VDEYPTDKRL FTIEDVHELD LPNHPNHLHL FYKQGGLTPK QIIESCMRMK
PDHVLLAELR GDEAWTYLEM LNTGHEGSIT TIHANDCYST PARLAGLVKQ SEVGQTLDYH
HIMRTIRTSI DVIAFFKHTH LVELFYDPVE KNRLLSEG
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