Gene VIBHAR_p08202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08202 
Symbol 
ID5552733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand- 
Start bp31893 
End bp32429 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content49% 
IMG OID640898079 
Productsex pilus assembly and synthesis protein 
Protein accessionYP_001436069 
Protein GI156936718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value0.994682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA AACTGTTTAT GGCCGCTATC ACAGCGGCTT TTTTATTGCC TGTTCAACCC 
GCTTTCGCGG CAAGCGACGA TGAATGTGCT ATTTGGCTTT GTCTTCCGAC AGGCTTTCCA 
AGTGGTTGCA GTGGCGCTAA GAAAGCGTTC GTAAAGCGTA TTAAGAAGTT CAAACCGCCC 
CTTCCAAGCT TTACGTCCTG TTTGTTTTCC GGCGACGTCC CTATTGGCAC ACCGTCGAAT 
GATACCGACA TGTTTGCTCG CGATGGCCGT GCCGCCTACA TCCCACCACG CGTTGAATGC 
GTGAAGTGGG AAACAGGCAA AGACTGGAGC CGATGCAGTA AAACAGAGGT TCGACCGAGC 
CAAATCATTA AAAACCAGAG CTGCCATGTG AACCACAAAG AAGGGACTTC AAGTCCAAAA 
TATTGCTCAC ATACCATCAG CTACGTTGAA ACGTTCCAAG ATGGCGAGCA GTACGGGGAA 
ACCTATTACT TCGATAATGC AGGGAACACG TACATCGAAG GCTCAACCGA ACACTAG
 
Protein sequence
MKHKLFMAAI TAAFLLPVQP AFAASDDECA IWLCLPTGFP SGCSGAKKAF VKRIKKFKPP 
LPSFTSCLFS GDVPIGTPSN DTDMFARDGR AAYIPPRVEC VKWETGKDWS RCSKTEVRPS 
QIIKNQSCHV NHKEGTSSPK YCSHTISYVE TFQDGEQYGE TYYFDNAGNT YIEGSTEH