| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08201 |
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| Symbol | |
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| ID | 5552734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | - |
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| Start bp | 29680 |
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| End bp | 31884 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640898078 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001436068 |
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| Protein GI | 156936717 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0178997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTTT ATATCGCGGA GAAACCCTCC CTTGCCAAAG CCATCTTCGA AGGGTTAGGT
GGTAACCCGC AAACGCAGCG AGGAGAGGGG TTTTATCAAC ACAAAGAGCA TGTCGTGACG
TACTGTGTTG GACACCTTTT AGAAACTTAT GATCCTGACG ACTACGATGA GAAGTATGCG
AAGTGGACGT TTGATGACCT ACCTATCTCG ACAGTCTACC CGCCGACCCT CAAACCCATT
CCAGACACCA AAAGCCAACT TCAAACCGTG CTTAACTTCA TCAAGAAAGC CGACACCATT
GTTCACGCTG GCGACCCTGA CGACGAAGGG CAATTGTTGG TTGATGAGGT GCTTAACTAC
GCAGGAAACA CCAAGCCCGT TCAGCGCCTA TTGGTCGCTG ACTTGAACCT TGCTCCGGTT
CAAAAAGCAC TGGCAAACAT GGAGTCAAAC GAGAAGTACG TTCCCCTTGG TATGAGCGCT
CTAGCGCGTT CTATTAGCGA TAAGAGCTTT GGGTATAACC TAACGCGGGG TTGTACCTTA
AAAGGTCGTG AGAAAGGCTT TCAGGGCGTG CTCAATGTAG GCCGCGTTAA AAGCGCGGTC
ATGGGTTTGG TGAACGAGCG AACGCTGGCA AACCAAAACC ATCAAAAGAG CTTCTATTAC
GATGTTTATG CGCAGTTTGA GTGTGGCGAA AATCGCATAA AAGCGAAGTA CAACACCAAA
GAGAGCGATC AGGTTGATGA TAAAAAGCGT TTAATTTCAG CATCTAACGC GAGCTTCATT
CAAGACTCTG TGACCAATAG ACCAGGACTG GTGACATTGG TCGTCACTAA GCCCGAAAAG
AAGCACGCAC CACAGCCATT AAACCTTTCT GCGCTGCAAC AACTTTGCGC AAAAAGTTAC
GGTTACAGTG CTAAAAAAAC ACTGGACATT GCCCAAAGCT TGTATGAGAC GCACAAGCTC
TTAACCTACC CTCGAACGGA CAATCGCTTT ATTTCCGACG AACACTACTA TCAAAGCAGT
GATATCCTCG TCGCTATCGG CGCAACCTGC CCTAGCCTGA CCGACTCGAT TACCAATACC
AATGTTGATA TGACGCGCAA GCACAAGGCA TTCAACACCG ATAAAATCGA GGCGCACCAC
GCCATCATTC CAACAACCAA ACATGGAAGC CAAGCCAGCC TAAACAAAGA AGAGCGACAG
GTTTATGAGT TGGTTTCTCG TTACTTCATC GGTTTGTTTT ATCCAGAGTC CATTCGAGAT
AAAACCAAAG CCATGTTTGA AGTCGAAGGC TACCAGTTCA GCGCAACGCA AAGCGTACTC
GTTGAGCAGG GATGGGAAGT GCTGCACAGC GAAGAGAAGG AAACCCAAAG CGACCATGAT
GGGTTTGACT TAGCCACGCT GAAATCAAAC ACAGCGACCA CCTGTGTCGA AAGTGAGGTT
GAACAAAAGG AAACCAAGCC ACCGAAATTG TTTACGGAAT CAACACTGTT GGCCGCAATG
ACCCGCGCCG CCAGTTTCAT TGATGATCCA GAGCTTCGCG CCAAGCTAGA AGCTAAGGAC
AAAGACAGCA ATGACCAAGG CAGTATCGGA ACGGAGGCAA CCCGCGCCAG CATCTTGAGC
CAGCTTGCTG CAAACACTGA ACTCATCTCG ATTAGCGAAG AAAAAGGTTA CAAGGAGAAG
GTTTGGAGAA CCACCAAGCA AGGCCAAGAG CTTTGTGCCG CCCTTCCTAA CGAAATCATC
AAACCCGATA TCTCTGCGAT CTGGGCAGAG AAGCAAGCCT TCGTTAAGGC GGGTGAAATG
TCGGTTGAGG ACTTCATTGC CGATGTGGAC AGCTACATTA CAGAGCGCAT CGATGACTTA
GACAAGAACG GTATTAACAT CACTTCAAAC ACCGTCCCTT GCCCTAGTTG CGGCAAACCC
TTGTACAGAC GCAAAGGGCG AAATGGTTGG TTTTGGTCGT GTTCTGGTTA TCCAGAATGC
GATAAGGCTT ACCCTGACCT ACAAGGCAAA CCTGACTTTA GGCCAAGAGT TAAGCCTGTT
GTCAGCGCTC ATAAATGCCC AACTTGCAGC AAAGGTCTAA TACGCCGCAA ATCACCAAAA
GGAAAAGGCA AATACTTTTG GGCGTGCTCT GGCTATCCAG ACTGCATCAC CACGCTCTTT
GATCGCAAAG GTCGTCCTAA CTATGAAAGC GCTAAAAGCA GCTAA
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| Protein sequence | MIVYIAEKPS LAKAIFEGLG GNPQTQRGEG FYQHKEHVVT YCVGHLLETY DPDDYDEKYA
KWTFDDLPIS TVYPPTLKPI PDTKSQLQTV LNFIKKADTI VHAGDPDDEG QLLVDEVLNY
AGNTKPVQRL LVADLNLAPV QKALANMESN EKYVPLGMSA LARSISDKSF GYNLTRGCTL
KGREKGFQGV LNVGRVKSAV MGLVNERTLA NQNHQKSFYY DVYAQFECGE NRIKAKYNTK
ESDQVDDKKR LISASNASFI QDSVTNRPGL VTLVVTKPEK KHAPQPLNLS ALQQLCAKSY
GYSAKKTLDI AQSLYETHKL LTYPRTDNRF ISDEHYYQSS DILVAIGATC PSLTDSITNT
NVDMTRKHKA FNTDKIEAHH AIIPTTKHGS QASLNKEERQ VYELVSRYFI GLFYPESIRD
KTKAMFEVEG YQFSATQSVL VEQGWEVLHS EEKETQSDHD GFDLATLKSN TATTCVESEV
EQKETKPPKL FTESTLLAAM TRAASFIDDP ELRAKLEAKD KDSNDQGSIG TEATRASILS
QLAANTELIS ISEEKGYKEK VWRTTKQGQE LCAALPNEII KPDISAIWAE KQAFVKAGEM
SVEDFIADVD SYITERIDDL DKNGINITSN TVPCPSCGKP LYRRKGRNGW FWSCSGYPEC
DKAYPDLQGK PDFRPRVKPV VSAHKCPTCS KGLIRRKSPK GKGKYFWACS GYPDCITTLF
DRKGRPNYES AKSS
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