| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08200 |
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| Symbol | |
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| ID | 5552735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | + |
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| Start bp | 28171 |
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| End bp | 29208 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640898077 |
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| Product | permease |
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| Protein accession | YP_001436067 |
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| Protein GI | 156936716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000000000119775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCAG AAATTATTAC AATGGCCAAA GAAGCAGGAC ATATGTTTCT GTTCTTGGCT
ACTGAACTAG TCATCCTATT TTTAGCTGTA AGTTACCTAG TAGGTATTCT TCAAGAGTTT
TTAACCCCAG AGAAAATCCA ATCAATCCTG AGCTCTAGAA AAGGTAAAGG CTACATTGTG
GCAGCGTTCC TTGGTGCTAT CACACCATTT TGCTCTTGCT CAACTATTCC TTTCTTGAAA
GGCCTATTGA GAGCTAGAGC AGGTTTCGGT CCAATGATGG TGTTCTTGTT TGCATCACCA
CTGCTTAATC CAGTCATCAT TGGTTTGTTT ATTGCAACAT TCGGCTTGAA CGTCGCTGTG
TTCTACTTTG TAGTAGCAAT GGTAGTTGCC GTTTCAGCTG GTTTTATCTT AGAGAAGTTA
GGTTTTGAAA AATATGTACG TCCAGAAGCG TATGAGTCAA CAGATTCAGG CTCAAGTTGT
GGTACTTCTT GTGGTGACTC TAAACCAGCA CCTAAAAAAG AATCTAGCTG TGGTACTTCT
TGTGGTGACT CTGTACCAGA AGTGCAAATT TCTTGCTGCT CATCAATCGG TGAAGCTGCG
GCTACAATTG TTCCATCCGC AGAGCCAAGC CGTTGGGTTC GTATTTGGAT AAATACATGG
AAAGACTTCA AACAAGTTCT TCCATACTTG CTAATGGGTA TTGCTCTCGG TTCATTGATC
TATGGCTTTA TCCCAACAGA TTTAATCGCT GAGTATGCAG GTGCTGGTAA CTGGTATGCA
ATCCCTGTAG CGGCTGTTAT CGGTATCCCA CTATACATTC GTGCAGAGGC CGTTATCCCA
CTAAGTGCTG CTCTAGTTCA GAAGGGGATG GCACTTGGTT CTGTAATGGC ATTGATCATC
GGCAGTGCGG GCGCAAGTCT AACCGAGGTA ATCTTGTTGA AATCAATCTT CAAGAACCAA
ATGATTGCAG CGTTCCTGTT CGTCATCCTA AGTATGGCAG TGGGTGCAGG TTACTTGTAC
ACATTCTTGT TTGCTTAA
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| Protein sequence | MSPEIITMAK EAGHMFLFLA TELVILFLAV SYLVGILQEF LTPEKIQSIL SSRKGKGYIV
AAFLGAITPF CSCSTIPFLK GLLRARAGFG PMMVFLFASP LLNPVIIGLF IATFGLNVAV
FYFVVAMVVA VSAGFILEKL GFEKYVRPEA YESTDSGSSC GTSCGDSKPA PKKESSCGTS
CGDSVPEVQI SCCSSIGEAA ATIVPSAEPS RWVRIWINTW KDFKQVLPYL LMGIALGSLI
YGFIPTDLIA EYAGAGNWYA IPVAAVIGIP LYIRAEAVIP LSAALVQKGM ALGSVMALII
GSAGASLTEV ILLKSIFKNQ MIAAFLFVIL SMAVGAGYLY TFLFA
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