| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08194 |
|---|
| Symbol | |
|---|
| ID | 5552742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009777 |
|---|
| Strand | - |
|---|
| Start bp | 24023 |
|---|
| End bp | 25222 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640898071 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001436061 |
|---|
| Protein GI | 156936710 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 0.679296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGATA TTCAAATTCT ACAGCAAGCT ATTGAGAATC AATGCCCTGA CATTCACAAA
AAACGACTTA GATCTCTGAT GCTTGCAACC AAAGCGGTTC TTGATGGCTC TGCTCTAACA
CTCACTAAAA TTGGAAGAGC TCTCGACACT GATACCACAG TGAAACATGC CATCAAACGT
ATCGACCGAC TACTTGGTAA TCGCAATCTA CATCGTGAAA AAGAATCCAT ATATAGATGG
CATGCGTCTT TTATTACCCG CGCCAATCCA TTTCCGGTGG TGCTGGTCGA TTGGTCGGAT
GTTCGAGAGC AATTACGCTA CATGACATTA CGTGCTTCGG TATCTGTTAA AGGTCGCGCC
GTCACGCTTT ATGAGCAGGC ATTCGAGTAC AAAAACTACA ACTCACCCAA AAGTCATCAA
CTCTTTCTCG ATAAGCTTCA ATCCCTGCTC CCCCAAGGCT GCACGCCCAT CATTGTCTCT
GATGCGGGCT TTAGAAATAC GTGGTTCCGG CAAGTGGCCA ACAAAGGTTG GTTCTGGCTT
GGGCGTGTAC GTGGCGAAGT CTCGATTAAG TGCGGCGAGG GCGCGTGGCT ATGGAACAAA
ACGTTTTATC CTCAAGCAAC AGATAAACCA CTGTTTTTAG GAGAAAGCCA ACTTGCTAGG
CGTTCGCCGC TCAGGTGTTT TGCGTATTTG TATAAAGGCC AGCCCAAAGG CAGAAAAGCG
CATCGACATA GTCGAACCTG CCAGAAACAC TCGGCTGGGA AAGTGTTCCA TAAAGGAGCA
AAAGAGCCTT GGCTTCTGGT CACCAACATC CCCAATCATG TACTTAACGG CGTCAAAATC
ACTCGTTTGT ACGCCAAAAG AATGCAAATT GAAGAGTCGT TCCGAGATTT GAAAAGCCCC
GCTTACGGAT TAGCGCTACG CCACAATCGG ACACGTTGCA CTAAGCGCAT TGATATCTTG
CTACTCATGG CATTGATGGC CGAAATCATC ATGTGGTGGA ATGGCTTAAT CGCCATGCAA
GCCAAATGGC ATTATGACTT CCAAGCTAAC ACCATCAAGC ATCGGCGTGT GCTCTCGATC
CCTAGACTGG GAAAGGAAGT ACGCAGCCAT CGGCGATACC GAATAAAAGA ATCGCAATAT
CATTGGGCGA TGGTGGAATA TCAACGCCTC ACCCATACTT GCGGGTTAGG TGAATTATGA
|
|---|
| Protein sequence | MRDIQILQQA IENQCPDIHK KRLRSLMLAT KAVLDGSALT LTKIGRALDT DTTVKHAIKR
IDRLLGNRNL HREKESIYRW HASFITRANP FPVVLVDWSD VREQLRYMTL RASVSVKGRA
VTLYEQAFEY KNYNSPKSHQ LFLDKLQSLL PQGCTPIIVS DAGFRNTWFR QVANKGWFWL
GRVRGEVSIK CGEGAWLWNK TFYPQATDKP LFLGESQLAR RSPLRCFAYL YKGQPKGRKA
HRHSRTCQKH SAGKVFHKGA KEPWLLVTNI PNHVLNGVKI TRLYAKRMQI EESFRDLKSP
AYGLALRHNR TRCTKRIDIL LLMALMAEII MWWNGLIAMQ AKWHYDFQAN TIKHRRVLSI
PRLGKEVRSH RRYRIKESQY HWAMVEYQRL THTCGLGEL
|
|---|
| |