Gene VIBHAR_p08189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08189 
Symbol 
ID5552747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand- 
Start bp19874 
End bp20563 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID640898066 
Producttransposase 
Protein accessionYP_001436056 
Protein GI156936705 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCAAAC AACTAAATTT GGAGGCTAGC ATGAACAACG ATAGCATAAT TTTCATTGGC 
TTAGATACGC ATAAGTCCTT TATCCAAGTC GCAGTTCTGC AAGGTCATCG TGGTGCTCAA 
CCGCAACATC TTGGCCGCAT TAAGTCAAAC AAGTCAGCTT TGGTTAAATT GGCTCTGCAA 
CTTCAGTCCA AATATCCTAA AGCTACCCTT CATTTTGTCT ATGAGGCTGG ACCATGTGGA 
TACTGGACTT ACCGCCTGCT CACAAGCATT GGGCACTGCT GCTATGTCGT CGCTCCTTCA 
CTTATCCCTA AAAAGCCTGG TGACCGTGTG AAGACCGACA AACGAGATGC CGCTAAGCTT 
GCCAAACTCT TCAAGGCTGA AGAGCTCACC CCTATCTATG TTCCAGAAGC CGAAGATGAA 
GCCATACGAG ATCTCTCAAG AGCCCGAGAA ACTGCTATGA AAGATCTCAA GGACGCTAAG 
TTCCAACTCA AAGGCTTTCT ACTTCGCAAT AATGTTCAAG CAACAGTGAA TGACAACTGG 
TCTAAAAAGC ATCTACGGTG GCTGACAGAC CTCATTCTCC CTCACTATAG CCAACAGATC 
GTTCTGCAAG AGATGATCAT CACTATCAAC GCCTTGTTAA GGTGTGAGGC ACGCAATACC 
GAAGCTTCCG CATCCCACCT TAACCACTAA
 
Protein sequence
MFKQLNLEAS MNNDSIIFIG LDTHKSFIQV AVLQGHRGAQ PQHLGRIKSN KSALVKLALQ 
LQSKYPKATL HFVYEAGPCG YWTYRLLTSI GHCCYVVAPS LIPKKPGDRV KTDKRDAAKL 
AKLFKAEELT PIYVPEAEDE AIRDLSRARE TAMKDLKDAK FQLKGFLLRN NVQATVNDNW 
SKKHLRWLTD LILPHYSQQI VLQEMIITIN ALLRCEARNT EASASHLNH