| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_R0038 |
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| Symbol | |
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| ID | 5540488 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3883094 |
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| End bp | 3886016 |
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| Gene Length | 2923 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 64% |
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| IMG OID | 640895114 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.640363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0435947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAGACAGAAG GAGCACACGG AGGATGCCTC GCCGCTGCGC GCCGATGAAG GACGCGGCAA
CGCTGCGAAA AGCGTGGGGG AGCCGCGCGC AGGCTGTGAT CCCACGATGT CCGAATGGGG
CAACCCGTCC GTGATACGGA CACCGCGCAA TGCGGAGGGC ACCGGGGGAA CTGAAACATC
TTAGTACCCC GAGGAACAGA CAGCATCCCC GGAGTAGTGG CGAGCGAAAC GGGGTGAGCC
CAAACCACGA CCGTGGCAAG GCGGCAGCCG TTGCGGTCGT GGGGTTGAAG GGAGCGCTGC
GGGGGGACTG CCGACCCCCC CGCGCGCGTC GCACCCGGGC GACGAAGCCG ACTGGAAAGC
GGCGCCACAG AGCGTGACAG CCGCGTAGTC GGGCGGGTGC GGCGGCGCGA GGCGCTTGCC
TGAGTAGCGC CGGACACGAG CAACCCGGCG TGAAACTGGG GCGACCACGC TCCAAGGCTA
AATACGCGCA GCGAGCGATA GCGAACGAGT ACCGTGAGGG AACGGTGAAA AGCACCCCGG
CGAGGGGAGT GAAAGAGAAC CTGAAACCGT GTGCTTCCAT GCAGTCGGAG CCCCCGTGAG
GGGGTGACGG CGTGCCTTTT GGAGTATGAT CCGGCGAGTT ACCCTCGGTG GCCAGGTTAA
GGCAGTGACA GCCGGAGCCG GAGCGAAAGC GAGTCTGAAG AGGGCGCGCG GTCGCCGGGG
GTAGACCCGA AACCGCTTGA GCTACCCATG GGCAGGGTGA AGCGCGCGTA ACAGCGCGTG
GAGGCCCGCA CCGGTGTGGA TTGCAAACCG CTCGGATGAC CTGTGGGTAG GGGTGAAATG
CCAAACGAAA GCGGAGATAG CTGGTTCTCC CCGAAATGCA TTGAGGTGCA GCCTGCGGAA
TGCCGCGCGC GGAGGTAGAG CGCTGGTGTG GTGCGGGGGC TTCACCGCCT ACCAAACGAC
GCCAAACTGC GAATGCCGCG CGGGGAAGCG CAGAGTGAGA CGTGCGGCGC AAACGTTGTA
CGTCGAGAGG GAAACAACCC AGACCTGCAG CTAAGGTCCC GAAATCGACC CTGAGTGGGA
AAGGATGTGT CGTTGCGGAG ACAACCAGGA GGTTGGCTTA GAAGCAGCCA CCCTTGAAAG
AGTGCGTAAC AGCTCACTGG TCGAGTGACG ATGCGCCGAC AATCCAGCGG GGCAAAGGGT
CGTACCGAAG CTCAGGACCG GAAGGGTGGT AGGGGAGCGT CGTGGACGCG GCGAAGCGGC
GGCGGAAGCC GGTCGTGGAG CGTCGACGAG TGCGAATGCC GGAACGAGTA ACAGCGAAGC
GGGGTGCGAA CCCCCGCCAC CGGAAGCCTC AGGGTTCCGC CGCAAGGGTG ATCCGCGGCG
GGTTAGTCGG GCCTAAGGGG AAGCGCGAGC GACACCCGAT GGACAACAGG TAGACAGTCC
TGTACCGGTT ATGCGCCGTT TGACGGACGC GGGACGCTGG GGGGTAGGCG CTGCGGTCAG
ACGAGGACCG TCCAAGCTGG TAGGGAGACG GCGGAGGGAA GTCCGCGCCG TCGGCGACCG
AGAAGCGAGA GCGAGCTGGC GCGCGAGCGC ACGGCAAGAG CGTTGAACCC GCACAGCCGA
GAAAGGCCTG CTACGGAGGC GCATGACCGC CCGTACCGCA AACCGACCCA GGTAGGCTGG
CTGAGGAAGC TAAGGTGGAC GAGTGATCCC TGGTTAAGGA ACTCGGCAAA TTGACCCCGT
ACCTTCGGAA GAAGGGGTGC TCGGTCGGTG AACTCCGGCG CGGAGGGAGC CGATGCGAGT
CGCAGCAAAG CGGCCCAGGC GACTGGATAC CAGAACCACA GGTCCGTGCT GAAGCCGAAA
GGCGACGTAT ACGGGCTGAT GCCTGCCCAG TGCCGGAAGG TTAAGGGGAG GGCTGTAAGG
TCTGAACCGA AGCCCCGGTG AACGGCGGCT GTAACTATAA CAGTCCTAAG GTAGCGAAAT
TCCTTGTCGG GTAAGTTCCG ACCCGCACGA AAGGCATCAC GATCTGGGCA GTGTCTCGAC
CAGGGGCTCG GTGAAACTGC GCTGGCCGTT AGGACGCGGC CAACCCGTAG CAGGACAAAA
AGACCCCGTG GAGCTTTACT ACAGCTTGCC ATTGTGCGCG CTCCGGGCTT GCGTAGGATA
GGTGGGAGCC GGAGAACGGA CCCTTGCGGG GGTGCGGGAG GCGACGGTGA AATACCACTC
TGGCACGGCG TGCGCACTCA CCCGCGAGAG CGGGGACCGT GGCTGGCGGG TAGTTTGTCT
GGGGCGGACG CCTCCTAAAA GGTAACGGAG GCGCGCAACG GCGCCCTCAG GCGGGATGGC
AATCCGCCGG TGAGTGCAAA GGCAGAAGGG CGCTTGACTG CAAGGCAGAC AGGCCGCGCA
GAGATGAAAG TCGGCCTTAG TGATCCTACG GTTCCGCGTG GAAGGGCCGT AGCATAACGG
ATAAAAGCTA CCCCGGGGAT AACAGGCTGA TCGTGCCCAA GAGTTCACAT CGACGGCACG
GTTTGGCACC TCGATGTCGG CTCGTCGCAT CCTGGGGCTG GAGTCGGTCC CAAGGGTTGG
GCTGTTCGCC CATTAAAGCG GCACGCGAGC TGGGTTCAGA ACGTCGTGAG ACAGTTCGGT
CTCTATCCGC TACGGGCGGT TAGTGGCGTG CGGGGAGCTG CTCTTAGTAC GAGAGGACCG
GAGTGGACGG ACCGCTGGTG GAGGAGTTGT GGGGCGGCCT GCAGGCTCCG TAGCCATGTC
CGGCGGCAAG AACCGCTGAA AGCATCTAAG TGGGAAATGC CCCCCAAGAT GACGCCACTC
ACGACGGAAG GTCGGTAAGT CCCCCAGAAG ACGACTGGGA AGGCGGCGCC AGCTGGAGGC
CCCGTGAGGG GTAGAGGCGA GGCGTGCGCA TGGACGAGGG CTT
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| Protein sequence | |
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