| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4451 |
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| Symbol | |
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| ID | 5541964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5719492 |
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| End bp | 5721435 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896549 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001434485 |
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| Protein GI | 156744356 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0783644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000419686 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGTGG AGGAACTGCG GGCATCGCTG CCGAATATCG CAGAAGTCAT CGATCAACTG
ACGGTCAGTC AGTCGAACGA TCAGCGTCGT GTGCTGCTCC GTCAACTGGG GGCGCTCTGG
TATCGTCAGG ATGGTGAACC AGAGGTGCTG GCGGAACTCG GATTGGCGCT GTCGGAGTTG
CACGGCGTCG AGCCGGGTGT GGCGCTCTCC GAATTGCTGC TGGCATACGG CGCCGCGCGC
GAAGAGCAGC GCACCCGTGA GTGGGAAAGC CATCTGGTGC GCCGCATGGC GGAACTCAAA
GGTCTTCACC GCATTATCTC CGCCGCCAAC TCCACTCTCG ACCTGGACAC ATCAATGCAA
CTGGTGGTCG AAACCGTTGC AGAAGTGATC GGCGTGGAGG TCTGTTCGGT CTACCTGTAC
GACAAGAACA CCGACGATCT CACCCTGCGG GCGACGCACG GGCTGAATAA TGCCGCTATT
GGACAGGTGC GCATTCGTGT TGGGGAGGGC ATCACGGGAT GGGCGGCGCG GGAAGGGCGT
CCGATTGCCG TGCGCGATGT ACGCCGCGAG CCGCGTTTCC ACATCGAGCC AGGGTTGGGA
GAGGAACCGT ACCGTTCGAT GCTTGCCGTC CCGATTGTCC TTTTTAGCGT CGAACGGTTT
CATCTTGGCG CCGCGAAGTT GCAAGGCGTG ATTACCATTC AAACCTATGG TCCGCGTGAT
TTCACAGCGG AAGAGATCAA TTTCGTTGAG ACTGTCGCCG GCGAACTGGC GTTCTTTATC
GTCAACGCGC AACTCTACCA GCAAACCGAC GAACAGTTGC ACCAGAAGGT GCGTGAACTG
ACGACGCTGC AACAGGTCTC GAAAAGCATT GCCGAGCAAC TCAACCTTGA AGAGGTGTTG
AAACTGATTG TGGTCAAGGC GGTGGAGTTG TCCCGCGCCG AGCGCGCCGA CATTTTCCGC
GTCGGTCACG ACGGACGGTT GGAACTCGCT GCAACCTATG GCGGCTCGCC GCGCGGTGAA
ACTCCCACGT TCATTGCCCA GGCAGTGCGT GAAGCGCGCC CGCTGGCCGT CCACAATGCC
TTTAACGACT CTCGCTTTCC CGAGTTGGCA GAGATCGCCG CGCGCGAAAA CTTCTACTCG
CTCTTCTGTA TGCCCTTGCG CGTTCAGCAG GGCCGGACGA TTGGCGCCAT CTGCCTCTAC
ACGGGTGAAG CGCGCCATTT CGATTATGAG CATATGCGGC TCCTCTCGAC GTTCGCTGAT
GAGGCGGCGA TTGCCATCGA GAATGCGCGC CTGTACGACG AAAGCCTGCG CGCACTGGCA
GTCAAGTCGG CGATGTTGCA AGAAATGCAC CACCGCGTGC GCAACAATCT GCAAACCATT
TCGGCGTTGC TCACGATGCA GCAACGCCGC CTGGCGCCCA ACGACCGTGG CGCGCTTGCG
CTGCGCGACA GCGTGGCGCG CATCCAAGCG ATTGCCGGCG TCCACAACCT TCTCTGCCAC
GAAGATATTG GGGTGACAAC GGTTGATGCC GTGGCGCGGC AGATTGCCGA AAGCGCCCGG
CTCAGCCTGT CGTCGCCGGA ACGCCCCATC CACTTCGAAA TTCACGGCGA TCAGGCGCGC
GTCGGATCGC GCGATGCAAC CGTGCTGGCT ATTGTGCTGA ATGAACTGAT TGTCAACGCC
ATGACCCACG GACTGGCGGC AGAGGGTGGG CGCGTGATTA TTGAGACGAC AGAGAACGAT
GGCATGATCA CGGTCGAAGT ACGCGACGAC GGTCCAACCC GTGCAGCAAC CGCCGAACCA
TCGAGCGGCG GCAGCGGTTT GGGGTTGCAT ATCATTCGTA CCCTGGTGCA GGACGATCTC
CAGGGCGAGT TCTCGTTGAC CATTGGTGAT GAATGGACGG TTGCCCGGGT GCGCTTCCCA
CAACATGAAA GCGATGGTCA GTGA
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| Protein sequence | MLVEELRASL PNIAEVIDQL TVSQSNDQRR VLLRQLGALW YRQDGEPEVL AELGLALSEL
HGVEPGVALS ELLLAYGAAR EEQRTREWES HLVRRMAELK GLHRIISAAN STLDLDTSMQ
LVVETVAEVI GVEVCSVYLY DKNTDDLTLR ATHGLNNAAI GQVRIRVGEG ITGWAAREGR
PIAVRDVRRE PRFHIEPGLG EEPYRSMLAV PIVLFSVERF HLGAAKLQGV ITIQTYGPRD
FTAEEINFVE TVAGELAFFI VNAQLYQQTD EQLHQKVREL TTLQQVSKSI AEQLNLEEVL
KLIVVKAVEL SRAERADIFR VGHDGRLELA ATYGGSPRGE TPTFIAQAVR EARPLAVHNA
FNDSRFPELA EIAARENFYS LFCMPLRVQQ GRTIGAICLY TGEARHFDYE HMRLLSTFAD
EAAIAIENAR LYDESLRALA VKSAMLQEMH HRVRNNLQTI SALLTMQQRR LAPNDRGALA
LRDSVARIQA IAGVHNLLCH EDIGVTTVDA VARQIAESAR LSLSSPERPI HFEIHGDQAR
VGSRDATVLA IVLNELIVNA MTHGLAAEGG RVIIETTEND GMITVEVRDD GPTRAATAEP
SSGGSGLGLH IIRTLVQDDL QGEFSLTIGD EWTVARVRFP QHESDGQ
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