Gene Rcas_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4446 
Symbol 
ID5541959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5713675 
End bp5714856 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content59% 
IMG OID640896544 
Productgamma-glutamyl kinase 
Protein accessionYP_001434480 
Protein GI156744351 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.148731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGC TCTCTGCCCA CACCCGCGCC TGCGCGCTCT CGCCTCTTGC CCGCGCCTCT 
TGCCTCATAC CTGAACGTAT GGCCTATCCC AACCGCATTG TTGTCAAAGT CGGCACCAAT
GTTCTCACCG CCGGCGCCGA TAAGGTGCAT CGCCCGACAA TCGTGGCGCT GGCGCAGCAG
ATTGCTGCGG TGCGCAGTCA GGGGGTTGAG ATCGTGCTGG TGAGTTCCGG CGCTATCGCT
GTGGGGCGTG AACGCTTGAA CTTTCCGGCG CGACGGCGTG ATATTCCGCT CAAACAGATG
CTCGCGGCGG TTGGACAGAG CCGGTTGATG CATCTGTATG AGCAAATCTT CGAACTCTAT
GGCATTACCG TGGCGCAGAC GCTTCTGACC CGCGGCGATC TGGCGGACCG GAATCGGTAC
CTGAATGCGC GCAATACGCT GCTCGCCTGC CTGATGCACA ATGTTTTGCC AATCGTCAAC
GAAAACGATG TGGTCGCGGT CAGTGAGATT CGCGTCGGAG ACAACGATAA TCTTTCAGCG
CTGGTCACGA ACCTGGTCGA TGCCGATCTG CTCCTGATCC TGACCGACAT TGACGGTCTC
TACACCGCCG ATCCGCGCCG CGATCCATCT GCAACGCGGA TCGACCTGGT ACCCGAAATT
ACTGAACATA TCTATGCGAT CGCAGGCGGA AGCAATATAC GTGGCACGGG TGGCATGCTA
ACCAAAATTC AGGCGGCAGA CCTGGCGACG CGCAGTGGCG CTGAGGTGGT GATCGCGCGT
GGCGCTGAAC GCGATGTTAT TGCGCGCGTC GTGGCAGGTG AGGCGATCGG TACCCGCTTT
CCAGCGCAGG CGACAAACGT CGAGAGCCGA AAACGCTGGA TTCTTGCGGA AACCGTCCGT
CATAGCCGTG TTGTCGTCGA TGAAGGCGCG GCACGTGCCT TGATGACAGG CGGCAAGAGT
CTCTTGCCGG CCGGCGTGGT CGCCGTTGAA GGCGATTTTG CCCGTGGGCA AACTGTTCGC
ATTTATGCAA CCGATGGCAG GGAGATTGCA CGCGGTATCA CACAGTACGC GGCGGTTGAC
CTTCGCCGCA TTCGCGGGTT GCAATCGTCG CAGATTGCCG AAACGCTCGG CTTCGACTAT
GGTCCCGAAG CGGTGCACCG CGATGATATG GTGCTGTTGT AA
 
Protein sequence
MQRLSAHTRA CALSPLARAS CLIPERMAYP NRIVVKVGTN VLTAGADKVH RPTIVALAQQ 
IAAVRSQGVE IVLVSSGAIA VGRERLNFPA RRRDIPLKQM LAAVGQSRLM HLYEQIFELY
GITVAQTLLT RGDLADRNRY LNARNTLLAC LMHNVLPIVN ENDVVAVSEI RVGDNDNLSA
LVTNLVDADL LLILTDIDGL YTADPRRDPS ATRIDLVPEI TEHIYAIAGG SNIRGTGGML
TKIQAADLAT RSGAEVVIAR GAERDVIARV VAGEAIGTRF PAQATNVESR KRWILAETVR
HSRVVVDEGA ARALMTGGKS LLPAGVVAVE GDFARGQTVR IYATDGREIA RGITQYAAVD
LRRIRGLQSS QIAETLGFDY GPEAVHRDDM VLL