| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4442 |
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| Symbol | |
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| ID | 5541955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5711107 |
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| End bp | 5711637 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896540 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001434476 |
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| Protein GI | 156744347 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4113] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.133035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG ATCAGCGGTT TGTCCTTGAT GCATCTATCA CGCTTGCCTG GTGTTTTGAG
GACGAGAGCA GCGATCTGGC TGATGTGGCA CTGGATCGGT TGGCGCAAAC CTCAGCGCTG
GTTCCTGCGA TCTGGTCTCT GGAGATCGGA AGCGCCTTGC TCGGCGCTGA ACGACGTGGA
AGGTTGAGCC AGGCGGAAAG CAATCGCTTT CTATGGTTGA TTCGGGTGTT GCCGATTGAA
ATAGAAGCGC TCGCAGCGCC TCGAATGCTG AGCAATGGTG TCGCGCTCGC GCGTGAACAG
GGGCGGTCCA CCTACGATGC CGCGTACCTG GAGCTGGCGA TGCGCAATGG GTTGCCGCCG
GCAACGCTCG ACACAGCGCT GCAACGCGCA GCAAAACGCT GTGGCGTCCA TCTCATACCA
ATTACCTGTG ACCATCCGGC ATGGTCACCC CGAGCAGCGC GAGGGTTCGC GCGCGACCTG
CTCAGATTCC TCGCTGCGTT TACCCTGAGC GAAGCGAAGG GCTCGGAATG A
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| Protein sequence | MSVDQRFVLD ASITLAWCFE DESSDLADVA LDRLAQTSAL VPAIWSLEIG SALLGAERRG
RLSQAESNRF LWLIRVLPIE IEALAAPRML SNGVALAREQ GRSTYDAAYL ELAMRNGLPP
ATLDTALQRA AKRCGVHLIP ITCDHPAWSP RAARGFARDL LRFLAAFTLS EAKGSE
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