| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4432 |
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| Symbol | |
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| ID | 5541945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5700842 |
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| End bp | 5702101 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640896530 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_001434466 |
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| Protein GI | 156744337 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.97036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA AACCGACACA CCGCGTTGTG GTGACCGGTA TGGGAGCGGT GACGCCCCTC
GGAATCGGCG TGTCCGCATT CTGGAATGCC TTGCTGGAAG GGCGATCCGG CGTCTCGTTT
GCCACACGCT ACGACATTGC CACTATTCCA TATGTCATCG CTGCCGAGGT GCGCGATTTC
GACCCTCGTG ACCACATGGA CGCAAAGGCG GCGCGGCGTA TGGCGCGCTT CGCGCAGTTC
GCAGTTGCCG CGGCCGGTGA GGCGCTCCGC GATAGTGGAT TGAACCTCGA CGCCATCGAC
CGGACGCAGA TCGCGGTCGA TGTTGGCACG TCGCTCGGCG GCACAGCTGA GGTCGAGGAG
CAGGCGCTCA CATTCGAAAC CCGAGGACGC CGGCGGGTAG ATGCCTTTTA TATGCCAACG
TTCATCTCCA ATATGGCATC GTGTCAGGTG GCGATGCAGT ACGGTCTGCG CGGTCCCACA
ACGACGCCGG TGCTCGCGTG CGCCACCGGA ACCTACGCCA TTGGCGAGGC GGCGCGCATG
GTGCATCGCG GTGATGCACT GGTTGCGGTC TGCGGCGGGA CCGACGCTGG GGTGACGGCG
CTCAACGCGA TGGCGTTTGG CGTCATTGGC GCGATTGCGC CTCCCGGCGA CGATCCGGCG
CGCGCGGTGC GCCCGTTCGA CGCCCATCGC AAGGGGACTG CCGGCGGCGA AGGATGTGGT
ATTCTGGTGC TCGAACAGTT GGAGCACGCC CTGGCACGCG GCGCGCGCAT CTACGCCGAA
GTTGCCGGTT TCGGCGCAAC CGGAGATGCT TATCATCTCA CTGCACCCGC GCCTGGTGGT
GAGTTTGCTG CGCTCGCCAT CAACCGCGCG ATCGACGATG CCGGGTTGCG CCCAGAGGAT
GTCGATCATA TCAGCGCCCA TGGCACCGGC ACCCCGCTCA ATGATGCCGC CGAAACCGCT
GCAATCAAGC GCGCGCTCGG CGACCATGCG TATCGCGTGA CGGTCAGCGG CATCAAGTCG
ATGATCGGGC ACACGGCGGG CGCGGCAGGC GCGCTGGCGG CAATCGGGTG TATTAAGAGC
ATCGAAACCG GCATGGTTCC GCCGACGATC AACTACGAAA CGCCTGATCC GGCGTGCGAT
CTCGATTATG TGCCTGACCG GGCGCGCCGC CAGAATGTGC GGGTTGCGCT TGCGAATGCG
TTCGGCTTCG GTGGGCAAAA CGCCGTCGTC CTGTTTCGCC GCTATGAAGA CCATCGCTAG
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| Protein sequence | MKSKPTHRVV VTGMGAVTPL GIGVSAFWNA LLEGRSGVSF ATRYDIATIP YVIAAEVRDF
DPRDHMDAKA ARRMARFAQF AVAAAGEALR DSGLNLDAID RTQIAVDVGT SLGGTAEVEE
QALTFETRGR RRVDAFYMPT FISNMASCQV AMQYGLRGPT TTPVLACATG TYAIGEAARM
VHRGDALVAV CGGTDAGVTA LNAMAFGVIG AIAPPGDDPA RAVRPFDAHR KGTAGGEGCG
ILVLEQLEHA LARGARIYAE VAGFGATGDA YHLTAPAPGG EFAALAINRA IDDAGLRPED
VDHISAHGTG TPLNDAAETA AIKRALGDHA YRVTVSGIKS MIGHTAGAAG ALAAIGCIKS
IETGMVPPTI NYETPDPACD LDYVPDRARR QNVRVALANA FGFGGQNAVV LFRRYEDHR
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