| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4419 |
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| Symbol | |
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| ID | 5541932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5676480 |
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| End bp | 5679611 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896517 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001434453 |
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| Protein GI | 156744324 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.834068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.3832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG ATGCTATTGT CATCAAAGGT GCGCGTGAGC ACAATCTGAA AGGGATCGAC
CTGGAAATCC CGCGTGATAA ACTGGTTGTT CTGACCGGCG TCTCCGGGTC GGGCAAGTCG
TCGCTGGCGT TCGACACGTT GTACGCCGAA GGGCAGCGCC GATACGTCGA GTCGCTCTCG
GCATATGCAC GGCAGTTTCT CGGTCAGATG GAAAAACCGA AAGTCGATGC CATCGAGGGG
TTGTCGCCCG CGATCGCCAT CGAGCAGAAA AGCGCCTCGA AGAATCCACG CTCGACGGTC
GGCACTGTTA CCGAGATTTA TGACTACCTC CGTTTGCTGT ATGCCCGCGT CGGGACGCAG
CACTGTCACG TGTGTGGTCG TCCGGTCAGT TCGCAGAGCG CCGAGCAGAT GGTCAATCGG
GTGCTGACCC TGCCGACAGG GACGCGCTTT ATGGTGCTGG CGCCGCTTGT GTCGCAGCGC
AAGGGCGAGT ATAAAGATGT CTTCGCGGAA GCGCGCGCCG AGGGGTTCGC GCGGGTGCGC
GTCGATGGCG AGATTTTCGA TCTGGCGGGC GAGATCAAAC TCAATAAGAA GGTCAAGCAT
ACGATTGAGA TTGTCATTGA CCGTCTGGCG ATGCCGGCGC GCGACGCCGC GCGTGATCAG
GTGCGCTCTT CTGACGCTCC CATCGGTCGA GCACAGGAAG GTTCCCAGAG TGAGTGGGAC
GCTTTTGTGA CCCGACTGAC CGATAGTGTC GAGCAGGCGC TGCGGGTCGG CGAGGGGCAG
TTGATCATCA GCATTCAGAA CAAAACGGGC GCCGCCGAAG AATGGTTGAT GAGCGAAGCC
AATACTTGCA CGCACTGCGG TATTTCGTTC CCTGAACTCT CGCCGCAAAT GTTCTCGTTC
AACAGTCCGC AGGGCGCCTG CCCCGAATGC ACCGGTCTTG GCGTCCGGCT CGAAGTCGAT
CCGCTCCTGC TCGTTCCCAA CCCATCGCTG ACCCTGCACG AAGGTGCGGT GACGTATTGG
GGCGAACTGC GCAAGAAGCG TGACTCGTGG GGGTACCGCG CGCTGCTGGC GATTGCCCGG
CACTATGGAT TCGATCTCGA TACGCCTTGG GAACAACTCA GCGAACAGGC GCGTCACGTC
ATCATCTATG GCAGCGGGAA AGAGCGGATA CGTTTCCAGT GGGGTGATGA AGGCGGCGAT
AGCCGAGGTG AGTTTACCCG CACCTGGGAA GGGCTGGCAA GCGAGATTCG CCGCCGTTTT
CAGCAGACGG GCAGCGACTA CACACGCGAG TATTACCAGA GTTTTATGAG TGAGCAACCC
TGCCCGGCGT GCAGCGGCGC GCGCCTGCGC CCCGAAAGCC TGGCGGTCCG GGTTGGCGGA
TTGTCAATCC GCGACGTGAC ACGGATGACG ATTGCCGGGG CACTGGCATG GGTGAATGCC
CTGAGCGGCA TTTCCGGCAA CATCGCGCAT CTGGCAGACC TGGAGGGTCA GGTGATGCCC
GGGGTTGTGG CAGGAAATGG CGCTGCGCAT CACGGTGCAG TGACGCCATT GACCGATTAT
CAGATGGCGA TTGTCAACGA TGTGCTGAAA GAAATTCGTG AACGGCTCGG CTTTCTGCTG
AATGTCGGTC TTCATTACCT GACGCTGGAA CGTCCCGCGC CGACGCTCTC CGGCGGTGAG
GCGCAACGCA TCCGTCTCGC ATCGCAGATC GGCTCTGGTC TTGTGGGTGT AACGTACATT
CTCGACGAGC CGAGCATCGG GCTACATCAG CGCGACAATC GCAAACTCCT CGATACGCTG
CTCAAACTGC GCGACCTGGG CAACACCGTC GTGGTGGTTG AGCACGATCT GGAAACCATG
CAGGCGGCTG ACTGGATCAT CGATTTTGGT CCGGGCGCCG GGGTCAAGGG CGGTCAGGTC
GTCGCCGCTG GTCCGCCCAA TGTCGTGGCG GCATCGCCCG AGTCGCTGAC CGGTGCGTAT
CTCGCGGGGC GACTTGAGAT CCCTACGCCG CAGCAGCGCC GCACTGCGCG GGTGCGTCCG
GTTGCCAATG GATTGCAGGA TGCGCCGCGT CGTCGCCGGG TAGATCATCA GTCCGATCTG
GCGGAGGGAC CGTGGCTCGA ACTCGAAGGC GCCACGATGA ACAACCTGCG TGATGTGACT
GTTCGCTTTC CGCTGGGGGT CTTTATGTGC GTCACCGGAG TGTCCGGTTC GGGTAAGTCG
TCACTGATCA CCGAGACGCT CTACCCGGCG CTGGCGAATC GCCTGCATCG CGCTCAGTTG
AAGCCGGGAC CATTCCGCGC GCTGCGCGGG TTGGAGCATC TCGATAAGGT GATCGATATC
GATCAGCAAC CAATCGGGCG GACGCCGCGC TCGAACCCGG CGACGTATGT CAAACTGTTC
GACCTGATTC GTGAACTATT CGCCTCGACT AATGAAGCGA AACTACGTGG CTATAACGCC
GGTCGCTTCT CGTTCAACCT GAAGGGCGGG CGCTGCGAAG CCTGCGAGGG CAATGGCGAA
AAACGCATCG ATATGCAGTT CCTGGCAGAT GTCTGGGTGC GCTGCGATGT CTGCAAGGGC
AAACGGTACA ACCGCGAAAC GTTGCAGGTC AAGTACAAAG GCAAATCAAT CGCCGATGTC
CTTGATATGG ACGTTCAGAC GGCGCTGGAG TTCTTCGACA ATGTGCCGCG TATCAAGCGC
ATGCTCCAGA CGTTGCACGA TGTCGGGCTG GACTACATCA AACTCGGGCA ATCGGCGACG
ACCCTTTCCG GCGGCGAGGC GCAACGGGTG AAACTTGCGA AAGAACTGGC GCGCGTTGCA
ACCGGTCGTA CCATGTATAT TCTCGATGAA CCGACCACCG GGTTGCACTT TGCCGATGTG
CAGCGCCTGC TCACCGTGCT GCACCGTCTT GTGGATGCGG GCAACACCGT GCTCGTCATT
GAACACAACC TCGATGTGAT TAAGACCGCA GACTGGATCA TCGACATGGG ACCGGAGGGC
GGCGACGGCG GCGGCACGGT CGTCGCCGTC GGCACGCCTG AAGAGGTCGC CATGATCGAG
GCATCGCACA CGGGACGGTT CCTGCGCGAG ATTCTATATG CGACTGGGGT TAAGGGTGTG
GCGCAAGATT AA
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| Protein sequence | MAKDAIVIKG AREHNLKGID LEIPRDKLVV LTGVSGSGKS SLAFDTLYAE GQRRYVESLS
AYARQFLGQM EKPKVDAIEG LSPAIAIEQK SASKNPRSTV GTVTEIYDYL RLLYARVGTQ
HCHVCGRPVS SQSAEQMVNR VLTLPTGTRF MVLAPLVSQR KGEYKDVFAE ARAEGFARVR
VDGEIFDLAG EIKLNKKVKH TIEIVIDRLA MPARDAARDQ VRSSDAPIGR AQEGSQSEWD
AFVTRLTDSV EQALRVGEGQ LIISIQNKTG AAEEWLMSEA NTCTHCGISF PELSPQMFSF
NSPQGACPEC TGLGVRLEVD PLLLVPNPSL TLHEGAVTYW GELRKKRDSW GYRALLAIAR
HYGFDLDTPW EQLSEQARHV IIYGSGKERI RFQWGDEGGD SRGEFTRTWE GLASEIRRRF
QQTGSDYTRE YYQSFMSEQP CPACSGARLR PESLAVRVGG LSIRDVTRMT IAGALAWVNA
LSGISGNIAH LADLEGQVMP GVVAGNGAAH HGAVTPLTDY QMAIVNDVLK EIRERLGFLL
NVGLHYLTLE RPAPTLSGGE AQRIRLASQI GSGLVGVTYI LDEPSIGLHQ RDNRKLLDTL
LKLRDLGNTV VVVEHDLETM QAADWIIDFG PGAGVKGGQV VAAGPPNVVA ASPESLTGAY
LAGRLEIPTP QQRRTARVRP VANGLQDAPR RRRVDHQSDL AEGPWLELEG ATMNNLRDVT
VRFPLGVFMC VTGVSGSGKS SLITETLYPA LANRLHRAQL KPGPFRALRG LEHLDKVIDI
DQQPIGRTPR SNPATYVKLF DLIRELFAST NEAKLRGYNA GRFSFNLKGG RCEACEGNGE
KRIDMQFLAD VWVRCDVCKG KRYNRETLQV KYKGKSIADV LDMDVQTALE FFDNVPRIKR
MLQTLHDVGL DYIKLGQSAT TLSGGEAQRV KLAKELARVA TGRTMYILDE PTTGLHFADV
QRLLTVLHRL VDAGNTVLVI EHNLDVIKTA DWIIDMGPEG GDGGGTVVAV GTPEEVAMIE
ASHTGRFLRE ILYATGVKGV AQD
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