Gene Rcas_4414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4414 
Symbol 
ID5541927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5668170 
End bp5669552 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content60% 
IMG OID640896512 
Productmetallophosphoesterase 
Protein accessionYP_001434448 
Protein GI156744319 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.06867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCTA CTCTTCGCTC CCTTCCCCTG GCGTTCATTG GGGCGTGTGT CGCGCTGATC 
GTTCGGCGTC GGCTGCATCC GGTGCGCCTG CGCCCGACCG GTGAGACGAC CCCGCCAATC
GGTCCCAACG ATATTCGACC TGGAATCCGT CGCCTGGTGC TCAGCGATCT CCACATGGGG
GCAGGTGATC GCCGCGACGA CTTCAGCGCC GATGCCGAAC TTGCCGCGTT GCTGCGCTAT
TATGCTGCCG AACCGACGCC GACGGAATTG ATCCTGGCGG GGGATACGTT TGAATTTTTG
CAGGTCTGCC TGCCCGATGT GCCAGACCGC GAATGGTCGC CACGCGCGGC GGCGCGCCGC
CTTGAAGCCA TTCTGAACGC GCATGCGGAA CCGGTCGCTG CGCTGCGCGC TTTCCTCTCT
CGGCGCGACA ATCAGGTGAC GGTGATTATC GGGAACCATG ACTTCGAGTT GCACTATGCG
AGCGCCAAAC AGACACTGCG CCGGGCGCTC GGATTGGCGC CAGGTAATCC ACGCTTGCGG
TTTGGCGTGT CCTATGAAGG TGATGGCATC TTTCTCGTGC ATGGCAATCA GTTTGACCGC
TGGAACCGTT TCATTCACTT CAACGGCATC TGTGAGCCTT TCGAGGTAGT GTTCGGCACA
CGCCTGATCC GTGAAGCGAT CAATGTGCTG GAAGACGAGC CGGTGGATAT TGCCACGCTG
ATCGACAATA TCAAGCCGCT ATCCGCCATT TTCTGGTATG CCTTATCGCT GCCGACGCTG
CGCAACCAAT CCACTCGCCG GTTGGTGGTG CGCGGTCTGG TGTTGCTGGT CAATGTGCTC
CTACGCAACA CGGTCTATAT TCTCGACGAC GATCCGCAGC AGCAGACGCC GCGTTCGCTC
TGGAAACCGA TGTATCGCCA GGTCGCGCTG GCGGCGACGC TCCTGGGACG CGCGGCAGGG
GTGCGGCAGC GTTCTGGCGG TTTTCCCGAG ACTGTATTTC AGCGCGCAGC GGAGCACCAG
TTGCGCCGCT CGATCCGGGC TTTTGGGAGC ACGTCTGTTC ACAGCATGGC GCGCATTGCG
CGCGATCCGC AGCAGTGGTC GACCCATCTT TTTATTTGCG GACACACCCA TCTGGCACAG
GTCGTGGCGC TGAACGAGCG CCAGACATAT GTCAATACCG GCACCTGGAC GGACGTTATT
CTTGATGTTG CCACCTCACA GCGACAGCAG CAGCGCTTTC CTTATCTGGA AGTAACGTAT
CCCGCGCAAG GTTCGCCGCC ACATTGGCGG TTGTTGGTGT GGCGGGAGGC TGGCGAATCG
CCATCTCCTT GGCGCGATGA GCGCGCAACA ACGATGTTGG AAAAAGTCGA ATACCCGGTA
TAA
 
Protein sequence
MLSTLRSLPL AFIGACVALI VRRRLHPVRL RPTGETTPPI GPNDIRPGIR RLVLSDLHMG 
AGDRRDDFSA DAELAALLRY YAAEPTPTEL ILAGDTFEFL QVCLPDVPDR EWSPRAAARR
LEAILNAHAE PVAALRAFLS RRDNQVTVII GNHDFELHYA SAKQTLRRAL GLAPGNPRLR
FGVSYEGDGI FLVHGNQFDR WNRFIHFNGI CEPFEVVFGT RLIREAINVL EDEPVDIATL
IDNIKPLSAI FWYALSLPTL RNQSTRRLVV RGLVLLVNVL LRNTVYILDD DPQQQTPRSL
WKPMYRQVAL AATLLGRAAG VRQRSGGFPE TVFQRAAEHQ LRRSIRAFGS TSVHSMARIA
RDPQQWSTHL FICGHTHLAQ VVALNERQTY VNTGTWTDVI LDVATSQRQQ QRFPYLEVTY
PAQGSPPHWR LLVWREAGES PSPWRDERAT TMLEKVEYPV