| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4413 |
|---|
| Symbol | |
|---|
| ID | 5541926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 5667527 |
|---|
| End bp | 5668165 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640896511 |
|---|
| Product | phosphoribosylanthranilate isomerase |
|---|
| Protein accession | YP_001434447 |
|---|
| Protein GI | 156744318 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0329621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0569111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCA AAATCTGTGG TGTGCGCGCG CGTGACCACG CCCTGACGGC AGTCGATGCC
GGCGCCGATA TGCTTGGACT GGTGTTCGCA CCTTCGCGCC GTCAGATCAC GGTTGAAGAC
GCCGCATCCA TTGCGGAGGC GGCGCGTTTT GCCGCCCGTG GTCGCGGACG AGCGATCACC
CTGATTGGTG TATTCGTTAA CGAGACGGTG GAGCGCATCC GTGATATTGC ATCCTCCTGC
GGTCTTGATG GCGTGCAGTT GAGTGGCGAT GAGCCGGTGA TCTATGCGGA TGCGCTGGCG
CCCTTACTGG TCATCAAAGC CGTTCGCTTC GATGACTCGG CGCAGGAGCG CGCGTGGTTG
ATACATGACC AGGCGCATGT GCAATTGCTG GTCGATGCCC GTGTGCCGGG CAATTATGGC
GGCGCCGGCG TTGTCGCAGA TTGGGAACGC GCGGCTGAAC TGGCGCGCCG GCGCTCATTG
ATGCTGGCGG GTGGACTGAC CCCGGAGAAC GTTGCTGATG CCATAACGCG CGTTCGTCCA
TGGGGTGTCG ATGTCAGCAG CGGCGTCGAG AGCAATGGCG TAAAGGATCA CGGAAAGATT
CGGGCATTCA TCGCAGCCGC GCGCGCTGCT GCCAGATAA
|
|---|
| Protein sequence | MIIKICGVRA RDHALTAVDA GADMLGLVFA PSRRQITVED AASIAEAARF AARGRGRAIT
LIGVFVNETV ERIRDIASSC GLDGVQLSGD EPVIYADALA PLLVIKAVRF DDSAQERAWL
IHDQAHVQLL VDARVPGNYG GAGVVADWER AAELARRRSL MLAGGLTPEN VADAITRVRP
WGVDVSSGVE SNGVKDHGKI RAFIAAARAA AR
|
|---|
| |