| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4412 |
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| Symbol | |
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| ID | 5541925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5665141 |
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| End bp | 5667504 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896510 |
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| Product | hypothetical protein |
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| Protein accession | YP_001434446 |
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| Protein GI | 156744317 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00288] conserved hypothetical protein TIGR00288 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00112817 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0579767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCG ACAATCCGCG TCTCGACGTC GCTGTGTTCA TCGACTTCGA GAACGTCTAC
GTCAGTGTCC GCGACAAACT CGACGTCAAT CCAAACTTTG AAATCATCAT GGATCGCGTT
GCGGACCTGG GACGGGTGGT GATCGCCCGC GCATACGCCG ACTGGTATCG CTATCCGAGA
GTAACGAGCG CCCTGTACGC CAATGGCATC GAGCCGATGT ATGTCCCGAC CTATTACTAT
GATCGCGATC TGGGTCGGAC GGGGCGCGCC ATCAAGAACA GCGTCGATAT GAATCTCTGT
ATCGACGCGA TGAAAACACT GTACACCAAC CCGAACATCG GCAAATTCGT GCTCGCCACC
GGCGACCGCG ATTTTATTCC GCTGGTGAAT GCGATCCGCC AGCATGGCAA GGAAGTCATT
ATTATCGGAG TGGGGGGCGC CGCTTCGGGG CACCTTGCCC AAAGCGCCGA TGAGTTCATC
TTCTACGAGC AATTGCTGGG CAAGAAGCCG CAGCCGCTGC AAGCCGATGC GCCGCGTATC
CGCATGCCAG AGCGCGGGCG CGATGTTGAG GAGGTAGTGG AACCTGCGCC ATCCGTGCGG
ATGCGCCAGG AAGCGCAATC GGCGGAGCAC ACGCCGCCGC CTGAACCACC CGCTCCCGAA
ACCGCGCGTG AAGAAACCGA CATTTACGAC ATGCTCGTGC GGGCAGTGCA TCTGGCGCGC
GAACGAGGGT ATGTCTGCTC TTTCGGCTCG CTCAAACTCG TGATGAAAGA GTTGATGGGT
GGGGAGTTCA AGGAGAGTAA GTATCGCGAC TCGACCGGCA AGCCGTTCGC AAAGTTCAAA
GATTTTGCCC TCGAAGCCGA GCGCCGCGGC AAGGTGCAGG TTTTTACGAG CGGCGCCGTC
GTCGAAGTCT TTCTGCCCGG CGAGGACCCG TACAAACTTT CGCAGTTCGC CCAGGACCTC
AAAGAAGAAC CGCCGGTCAG CACGTCCACC ACGCCGGTGC ACGTCGATGC CCATATCGAT
GGTCGCCCGG TCTCGAGCAG CCGCCGCCGT CGCCGCCGTC GCAGCAGCAC AACTCGCACA
ACAATCTCGC CCGATACGAT CACTGCCCCA TCGCAGGATG AGTTCGTCGT GCATGAGGAC
GTGACCGACG AATTGATGAC GGAGGCGCTG CACGACGTGA TGAACGGCGA ATCCGCCGCG
ACGGACGTGG TCTTCGAGGA ATTGCTCGAC CGCCTGGAAG CCGAGCGTGA GCGACAGGAA
GCGCTTGCAT CGTTCGATGT GCCGATTGAC GAGCCAATGC TTGATGAGTT GCCCGATCTG
GAGGAGGAGC CGGATGTGAC GATATCGGGC GACAGTCTGG TGGAAGAACC GATTCTGGCA
GCGCCTGAAC CGGACGATCA GATGATGATT ATGGATAGGC CGGTTGAGCT GTCGGAGCCA
TTTGCGACGC CTGAAACACC GGTTGGTGAA CCAACAGCGC ACCTGCCGGA GACGCCTCCC
TTCACCGACG CCGAGTGGCA GATGTTGCGC GAGGTGGTCG TTTCGGCGGG ACGTCCTTTG
TCGTTCGCAC AGATCCACGA TCTGATGCGG GGCGCCCGCA ACAACGCCGG CATCGTTCGC
ACGAACGAAG AACTGCGGTC GCTGATCAAG CAGGCGATTA ACACCGGTGT CCTTCGCCGC
AGCGGCAAAG GCGCCCGCGT CGTGTATCAC CTGGCGCCCT ACGAAACATC CGCAGCGACA
GAAGGCGTCG ATGCCTCTGC GGTCAAGGCA TCGGAAGAGG CGGCGTCTGA GCCGTCGATT
ATCAGGGACG CTGTCGAGAC GATGGTTGTG TCCGAGGCAT CTGCGCCTGC GCCTGCATTG
GAGTCGCCTG AAATCGTTGC TGCCGAACCA CTCGCTGCCG CTGACGTATT ACCAGCGGAT
GTGACCGACG AGATGCCGCA GGGAAAGGTT CCTGAAGAAA CAGAGACCGC TGCCGAACCA
GAAGTGTTGG CGCCTGCGCC GGACGCAGTG GAAGAAGGCG TCGTCGCTCA TGGTGTGGAG
TCGCCGCCGG TCGTAGCGGA AGGATCGGTG ATGGCGGAGG AGACGCCACG TGAGACGTCG
GTCACCGTCG GCGTCCCGGC AGAGGCGCCG GTGACAGCAG TTGACGATCA CGCAACCGCA
GAGTCAAAGG TTGTCGACCA ACCGACGCCA CGCCGTCGTC GCACTACTGT GCGCACGAAC
GCAGAAGCCG ATCAAACGAC GGCGGAAGCG CGTCCAACAC GTTCACGCAG CAAAGCTGCC
GTTACCGCGC CGACCGAAGA AGCGCCGCGT CCGACACGGC GGCGCAAGAA AGTCGAGACG
ACTGAAGAAC CGACTGAGGT GTGA
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| Protein sequence | MATDNPRLDV AVFIDFENVY VSVRDKLDVN PNFEIIMDRV ADLGRVVIAR AYADWYRYPR
VTSALYANGI EPMYVPTYYY DRDLGRTGRA IKNSVDMNLC IDAMKTLYTN PNIGKFVLAT
GDRDFIPLVN AIRQHGKEVI IIGVGGAASG HLAQSADEFI FYEQLLGKKP QPLQADAPRI
RMPERGRDVE EVVEPAPSVR MRQEAQSAEH TPPPEPPAPE TAREETDIYD MLVRAVHLAR
ERGYVCSFGS LKLVMKELMG GEFKESKYRD STGKPFAKFK DFALEAERRG KVQVFTSGAV
VEVFLPGEDP YKLSQFAQDL KEEPPVSTST TPVHVDAHID GRPVSSSRRR RRRRSSTTRT
TISPDTITAP SQDEFVVHED VTDELMTEAL HDVMNGESAA TDVVFEELLD RLEAERERQE
ALASFDVPID EPMLDELPDL EEEPDVTISG DSLVEEPILA APEPDDQMMI MDRPVELSEP
FATPETPVGE PTAHLPETPP FTDAEWQMLR EVVVSAGRPL SFAQIHDLMR GARNNAGIVR
TNEELRSLIK QAINTGVLRR SGKGARVVYH LAPYETSAAT EGVDASAVKA SEEAASEPSI
IRDAVETMVV SEASAPAPAL ESPEIVAAEP LAAADVLPAD VTDEMPQGKV PEETETAAEP
EVLAPAPDAV EEGVVAHGVE SPPVVAEGSV MAEETPRETS VTVGVPAEAP VTAVDDHATA
ESKVVDQPTP RRRRTTVRTN AEADQTTAEA RPTRSRSKAA VTAPTEEAPR PTRRRKKVET
TEEPTEV
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