Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4406 |
Symbol | |
ID | 5541919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5657871 |
End bp | 5658524 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640896504 |
Product | hypothetical protein |
Protein accession | YP_001434440 |
Protein GI | 156744311 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.192664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.135313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTCGG TTTTGTTCGT CTGGGGCGGC TGGGAGGGAC ACGAGCCAAA GCGGTGTGTC GATATTTTTG CTCCGCTGCT ACGCGCCGAA GGGTACGAGG TGACGATCAG CGACACGCTC GACTCATACC TCGACCGCGA ACGCCTGCAC GCCTACAGCC TCATCGTTCA GGTCTACACC ATGTCAACAA TCACGCGCGA GCAGGAGCGA GGGCTGCTCG ACGCCATCGC AAGCGGCGTC GGCTTTGCCG GTTGGCACGG CGGCATGGCG GACGCATTCC GCCAGAGCAC CGACTATCAA TTCATGGTTG GGGGGCAGTG GGTTGCGCAT CCCGGCAATA TTATCGACTA CACAGTGAAC ATCATCAACC ACGACCATCC GATCACCGCC GGTTTGAACG ATTTTCGCAT GCACTCCGAA CAGTACTATA TGCACGTTGA TCCGAGTAAT CACGTGCTGG CGACGACCAC ATTCAGCGGC GAATACTGCC CCTGGATCGA AGGAGTGGTC ATGCCGGTCG TCTGGACGCG CATGTGGGGC AAGGGGCGCG TCTCCTACTG CTCGCTAGGG CACGTGGCGC GCGACTTCGA CGTTCCCGAA GCGCGCGAGT TGGTGCGGCG CGGCATGCTC TGGGCTAGCC GGAGCGAGCC TTGA
|
Protein sequence | MKSVLFVWGG WEGHEPKRCV DIFAPLLRAE GYEVTISDTL DSYLDRERLH AYSLIVQVYT MSTITREQER GLLDAIASGV GFAGWHGGMA DAFRQSTDYQ FMVGGQWVAH PGNIIDYTVN IINHDHPITA GLNDFRMHSE QYYMHVDPSN HVLATTTFSG EYCPWIEGVV MPVVWTRMWG KGRVSYCSLG HVARDFDVPE ARELVRRGML WASRSEP
|
| |