| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4389 |
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| Symbol | |
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| ID | 5541902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5641245 |
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| End bp | 5642426 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640896489 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001434425 |
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| Protein GI | 156744296 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.484216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCG ATGAAAAACT CGCCATTCTG GCGCCGGCGG CGCGCTTCGA TGCCTGCGAC
CGGTTCCTGG GGAAACGCCG CGCGCCGCCC CCTGCAACCG GATGGAACGA CGACGCTGTG
GTTGCCGATG CCGACAGCGA TGGGCGCGCG TTGCCGGTCT TCCGGTTGTT GCTGAGCAAC
CGCTGCGAAT GGAACTGCGC CTACTGCCCG TTGCGCTCCG GCAACGACAT GCCGCGCGCC
GCGCTGAACC CCAACGAACT CGCGCGCGTC GTTCTGCCGC GCGTCGAACG AAAGACGGTG
CAGGGGTTAC TTATCTCCAC TGGGGTCGAT GGCAGCCCGT CCGTTGCGAC CGAACGCCTG
CTCGATGCTG TTGAAGCGCT GCGCGCGCGC CATGGCTATA CCGGGTACGT CCACCTGAAA
TTGCCACCCG GCGCGCCCGC TGCGGACATT GAGCGCGCCG CGCGCCTTGC CGACCGTATC
AGCCTGAATC TGGAAGCGCC GACGGCAATG CACCTGGCGC GTATTTCGCC GGAGCGCGAC
TGGCTGCGCG ACCTGATCGC GCCGCTGGCG CTGGCGCGCG ACTGGAGTCG GACCGGCGCT
ATTCGGGCGG GGCTTGCGAC GCAGTTCGTG GTCGGCGCGG CCGGCGAAAG CGACCACGAT
CTCCTGGTGA CAACCACGTG GCTCTACCGC GACCTGGGGT TGCGGCGCGT CTATTTTGGC
GCGTTTCGAC CGGTTGCCGG CACGCCGCTG GAGCAGCGCG CACCCACGCC ATTCGTGCGC
GAACAGCGCC TCCGCGAAGC CGACTGGCTG GTGCGGCGCT ACGGCTTCGA TCAGCGCGAA
TTGCCCTATG ATGCGGCAGG CAACCTGCCG TTGCACATCG ACCCAAAACT GGCCTGGGCG
TTGGCGCACC CCGAACGCTT TCCGGTTGAA CTGAACAGCG CCGACCGCGA CGAACTGTTG
CGGGTGCCGG GGTTGGGTCC GGTGAGCGTG GCGCGCATTC TTCGTCTGCG GCGTGAAGGG
CGCTTTCGCG AACCGGCGCA CCTTGCAGCG CTCGGCGGAG CGCTTGCGCG CGCCCGTGAC
TTTGTGACGC TCGATGGACG CTTTTTCGGC AGGAACGAAC GTGACCGCCT GCGCCATTAT
GCCCGGCAAT CGGAAATTGC CGAGCAGTTG ACCTTGTGGT AG
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| Protein sequence | MDLDEKLAIL APAARFDACD RFLGKRRAPP PATGWNDDAV VADADSDGRA LPVFRLLLSN
RCEWNCAYCP LRSGNDMPRA ALNPNELARV VLPRVERKTV QGLLISTGVD GSPSVATERL
LDAVEALRAR HGYTGYVHLK LPPGAPAADI ERAARLADRI SLNLEAPTAM HLARISPERD
WLRDLIAPLA LARDWSRTGA IRAGLATQFV VGAAGESDHD LLVTTTWLYR DLGLRRVYFG
AFRPVAGTPL EQRAPTPFVR EQRLREADWL VRRYGFDQRE LPYDAAGNLP LHIDPKLAWA
LAHPERFPVE LNSADRDELL RVPGLGPVSV ARILRLRREG RFREPAHLAA LGGALARARD
FVTLDGRFFG RNERDRLRHY ARQSEIAEQL TLW
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