| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4381 |
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| Symbol | |
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| ID | 5541894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5634450 |
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| End bp | 5634866 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640896483 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001434419 |
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| Protein GI | 156744290 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1569] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | [TIGR00305] probable toxin-antitoxin system toxin component, PIN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAATG AACCGCGCTT TGTCTTTGAC ACCAATGTTG TTATCAGCGC GCTCCTCCTG
AGACATTCTG TTGCTCGCCA AGCCTTTGAC AGGGCAACAC GCACAGGAAA ATTGCTTGTC
TCCGGTATGA CTATTGAAGA ATTGAACGCT GTCCTGCGAC GCAAAGGATT TGAAAGGTAT
GTAACTGAAG AAGAGCGGAT GGAATTCTTG AGTGCTTTTG TTGGGGATGG TGTTTTGGTG
GAAATTGTCG AGCGCGTGGT GGCGTGTCGA GATCCCAAAG ATGACAAGTT TCTTGAATTG
GCTATCAATG GCAAGGCAAC CTGTATTGTG AGTGGTGACG AAGACCTGCT CATTCTACAT
CCGTTTCGCG GGATAGCGAT TGTGACACCT CGGCAATTTC TAGAGCACCC AATCTAA
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| Protein sequence | MANEPRFVFD TNVVISALLL RHSVARQAFD RATRTGKLLV SGMTIEELNA VLRRKGFERY
VTEEERMEFL SAFVGDGVLV EIVERVVACR DPKDDKFLEL AINGKATCIV SGDEDLLILH
PFRGIAIVTP RQFLEHPI
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