Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4363 |
Symbol | |
ID | 5541876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5618873 |
End bp | 5619583 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896469 |
Product | DtxR family iron dependent repressor |
Protein accession | YP_001434405 |
Protein GI | 156744276 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTAC GGATCGTGCA ACTGACCGGT ATCGACGGAA CCGACAGCAA CGGTACGGAA GACATTGAAC GCGATTGTCT CGATGTTGTG ACGGTATTAA GCGAACGGCG CGAGCCGGTT ATGGCTGCGC AGGTCGTTCA CTGGCTGCGA GCGCGCGCCC TGCCGCCGTC AGTGACGCTT GCGTTGCGAC GCCTGGAACA GAAGCGCCTG ATCTGGTGCG ACGATACCCA TGTTCTTCAT CTGACCGACG AAGGCGCAGC GGCTGGCGCG CAGATCCTTC GCCGTCGTCG CCTCCTCGAA CGTTTCCTCT ATGATACGCT CAAAGTGCCA TGGCACGAAG TGTACCGCGA GGCAAAACAT CTCGAACCGC TCCTCTCGCC GCTCATGGAA GCGCGAATCG AGGCGCTGAC CGCCGATGCA ACAACCTGTC CGTATGGAAA TCCTGTCCCT GGACGCAGCG ACGTGCATCC CGATGAACAA CTGCTCGTCA CGACTCCGCT CAATTCCTGG TTCATTATCT CGCGGATCGA CGAGGAAGCC GGCGAAGACA GTTGTGCGCT CCAGTTTCTC TGGACGCGCG GGTTGCGACC CGGAACGCCG CTGATCCGTC GTCCCGATAC GCACGATGGA TTGGTTGTGC AACGGGCTGA CCGGCGGATC GTGCTCTCGC GCCGGATCGC GCGCTTCCTC TGGGGACGGA GCAAACTCTA A
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Protein sequence | MPLRIVQLTG IDGTDSNGTE DIERDCLDVV TVLSERREPV MAAQVVHWLR ARALPPSVTL ALRRLEQKRL IWCDDTHVLH LTDEGAAAGA QILRRRRLLE RFLYDTLKVP WHEVYREAKH LEPLLSPLME ARIEALTADA TTCPYGNPVP GRSDVHPDEQ LLVTTPLNSW FIISRIDEEA GEDSCALQFL WTRGLRPGTP LIRRPDTHDG LVVQRADRRI VLSRRIARFL WGRSKL
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