Gene Rcas_4363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4363 
Symbol 
ID5541876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5618873 
End bp5619583 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content60% 
IMG OID640896469 
ProductDtxR family iron dependent repressor 
Protein accessionYP_001434405 
Protein GI156744276 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTAC GGATCGTGCA ACTGACCGGT ATCGACGGAA CCGACAGCAA CGGTACGGAA 
GACATTGAAC GCGATTGTCT CGATGTTGTG ACGGTATTAA GCGAACGGCG CGAGCCGGTT
ATGGCTGCGC AGGTCGTTCA CTGGCTGCGA GCGCGCGCCC TGCCGCCGTC AGTGACGCTT
GCGTTGCGAC GCCTGGAACA GAAGCGCCTG ATCTGGTGCG ACGATACCCA TGTTCTTCAT
CTGACCGACG AAGGCGCAGC GGCTGGCGCG CAGATCCTTC GCCGTCGTCG CCTCCTCGAA
CGTTTCCTCT ATGATACGCT CAAAGTGCCA TGGCACGAAG TGTACCGCGA GGCAAAACAT
CTCGAACCGC TCCTCTCGCC GCTCATGGAA GCGCGAATCG AGGCGCTGAC CGCCGATGCA
ACAACCTGTC CGTATGGAAA TCCTGTCCCT GGACGCAGCG ACGTGCATCC CGATGAACAA
CTGCTCGTCA CGACTCCGCT CAATTCCTGG TTCATTATCT CGCGGATCGA CGAGGAAGCC
GGCGAAGACA GTTGTGCGCT CCAGTTTCTC TGGACGCGCG GGTTGCGACC CGGAACGCCG
CTGATCCGTC GTCCCGATAC GCACGATGGA TTGGTTGTGC AACGGGCTGA CCGGCGGATC
GTGCTCTCGC GCCGGATCGC GCGCTTCCTC TGGGGACGGA GCAAACTCTA A
 
Protein sequence
MPLRIVQLTG IDGTDSNGTE DIERDCLDVV TVLSERREPV MAAQVVHWLR ARALPPSVTL 
ALRRLEQKRL IWCDDTHVLH LTDEGAAAGA QILRRRRLLE RFLYDTLKVP WHEVYREAKH
LEPLLSPLME ARIEALTADA TTCPYGNPVP GRSDVHPDEQ LLVTTPLNSW FIISRIDEEA
GEDSCALQFL WTRGLRPGTP LIRRPDTHDG LVVQRADRRI VLSRRIARFL WGRSKL