| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4360 |
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| Symbol | |
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| ID | 5541873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5615486 |
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| End bp | 5616472 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896466 |
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| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
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| Protein accession | YP_001434402 |
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| Protein GI | 156744273 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
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| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAA CCACCGGTCA CATTCCTGGC GCACAATGGT CGCTCTTCGG AGCGGAACTG
CACATTCCGG ACGGTTTCCT CAACCTGCCG ATCTCGATTG TCTGCTGGAT CGGCGCGATT
GCGCTCATTG CATTTGCCAC CCAACGCGCG CAACGCACGC TCGATGAGCG CCAGATGCCG
CTGATGGGCA TCATGGCAGC GTTCATTTTT GCGGCGCAGA TGATCAACTT CCCGGTCGCC
GGCGGAACGT CGGGGCACCT GCTCGGCGGT GTGCTGGCAG CGGTCACGCT CGGTCCGTGG
GCGGGGATTC TGGTGATGAC CGCCGTAATC GCCGTGCAGG CGCTGCTCTT CCAGGATGGT
GGGCTGCTGG TAATGGGGGC GAACATTTTG AACATGGGGT TAATCACGGC GTTGATCGGC
TATGGACTGT ATCGCAGCGT TATTCATCAG CGTCCGGCGA TTCGCCTGGC AGTCATTGGC
GTGGCAGCCT GGCTTTCGGT GATGGGCGCT GCGCTGGCGA CATCGCTGCA ACTCTGGTTG
AGCGGCACAG TTCCGCTCGA GGTGGTAATC CCGGCGATGA TGAGCGTGCA TGCACTGATC
GGCATCGGCG AGGCGCTGAT CACGGTCGTG GCAGTGTCAT TCATTCTCCG CACACGCCCG
GAACGTATGG CAACCGATGC GCAGCGCAGC GGCGCTGACC GCGGCTGGAT CATTGGCGGC
GCACTTGCCG CGCTCATCGT GGTCGTGTTG TCGCCGCTCG CCTCCGCCAA CCCGGACGGT
CTCGAGCGCG TGGCGGAGGA TATGGGCTTT ATCGATCTGG GGCAAAGCGC ACCGTATGAG
ATTATTCCCG ACTATACCGT ACCCTTCCTT GGCGAAACGC CGCTCTCGAC AATTGTAGCA
GGCATTATCG GGGCGCTGGT CGTCACTGTG GTCGTCGTCC TTATCGCACA GGCAGTGCGA
AGCCGGCAGG CAGGGATCAG GAGTTAG
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| Protein sequence | MGATTGHIPG AQWSLFGAEL HIPDGFLNLP ISIVCWIGAI ALIAFATQRA QRTLDERQMP
LMGIMAAFIF AAQMINFPVA GGTSGHLLGG VLAAVTLGPW AGILVMTAVI AVQALLFQDG
GLLVMGANIL NMGLITALIG YGLYRSVIHQ RPAIRLAVIG VAAWLSVMGA ALATSLQLWL
SGTVPLEVVI PAMMSVHALI GIGEALITVV AVSFILRTRP ERMATDAQRS GADRGWIIGG
ALAALIVVVL SPLASANPDG LERVAEDMGF IDLGQSAPYE IIPDYTVPFL GETPLSTIVA
GIIGALVVTV VVVLIAQAVR SRQAGIRS
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