| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4358 |
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| Symbol | |
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| ID | 5541871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5612649 |
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| End bp | 5613929 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896464 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001434400 |
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| Protein GI | 156744271 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.569485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTCCC CATATGCCAT TCCGCCATCG CGTCGCCGTC TTCGTATGCC GCATGCGCTG
CGCGCCTTGC GCCATCGCAA CTACCGGCTA TTGTTCTTCG GGCAACTCAT CGCGCATATC
GGGTTTTGGA TGCAGGCGAC CGCGCAAGGC TGGCTGGTAT TGCGCCTGAC GGACGCGCCA
TTCTGGCTTG GCGCCACCGC CGCTGCGCAG TCGTTGCCGG TACTGATCCT GTCTGCGCCT
GCCGGCGCTC TGGCGGATCG CATCCCAAAA CGCACCCTGC TGTTGATGAC CCAGGGAACG
GCAATGGCGA TGGCGCTGTT GCTGGCGTTG CTGATCTTCA GTGATGTCGT GCAGGTCTGG
CATGTCCTCA TCGCTGCCCT GATGGTCGGC ATTGCGTCTG CGTTCGAGAA CCCGGCGCGC
CAGGCGTTTA CCATCGAACT CGTTGGGCGA GAGGACCTGA TGAATGCCAT TGCGCTCGAC
TCGACCATCA TGAACGGCGC GCGCATTATT GGACCGGCGG CTGCCGGAGC GCTGGTCGCC
GTCACCGGCG AAGGTCCGGC GTTTCTGTTC AATGGGCTGA GCGTTCTGGC AGTCATCGGC
GGGCTGCTCA TGATGCGACT GCGCCCCTTC GTCGCGCCGC TGCGCCAGAG CCACTGGCAG
CAAATGCGCG AAGGGTTTGC CTATATACGC CGCGATGCGC GGGTGCGACT GCTGCTGCTT
CAGATCGCCG CCCACTGCGT CTTTGGACTG GCATACTTCC CACTCATGCC CTATTTTGCG
CGCAATGTGC TCGGCGCCGA TGCGCAGGGC TTCGGCGTGC TGGCGGCAAC CAACGCCGCC
GGGGCGCTGG CTGCCGCACT GATGATCACC CTCGTCGGCG ATCGTCTGCC GCGGGTTGGC
GTGCGTTCAG TTGCCTTGCT CAGTTATATG CTGTTGCTTG GTGCGTTTAC CCTGACGCGA
TCGTTTGTAC TGGCGATGGC GCTGCTGGCG GCGATTGGAT GGACGGGGAT TATGGTGCTG
ACGTTGACGA ATACCCTGCT GCAAATGGCC GTGCCGGACG ACATGCGTGG ACGGGTGATG
GGTGTCTATA TGCTCGTCGT GATGGGGGTC AGCCAGGTGA GCGGGCTGTT CCTCAGCAGC
GTCGCCGATG TTCTCGGCGA TGTGCCATTG GTCGTCGGAT GTTGGGCGCT GGTCGGCTGG
TGCATTCAGG TCTATCTCTT CACGCTGTGG CGACGCGCGC CGGATAATGC TGCGCAGGTC
GCGTCGTTGC CGCGCGTGTG A
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| Protein sequence | MSSPYAIPPS RRRLRMPHAL RALRHRNYRL LFFGQLIAHI GFWMQATAQG WLVLRLTDAP
FWLGATAAAQ SLPVLILSAP AGALADRIPK RTLLLMTQGT AMAMALLLAL LIFSDVVQVW
HVLIAALMVG IASAFENPAR QAFTIELVGR EDLMNAIALD STIMNGARII GPAAAGALVA
VTGEGPAFLF NGLSVLAVIG GLLMMRLRPF VAPLRQSHWQ QMREGFAYIR RDARVRLLLL
QIAAHCVFGL AYFPLMPYFA RNVLGADAQG FGVLAATNAA GALAAALMIT LVGDRLPRVG
VRSVALLSYM LLLGAFTLTR SFVLAMALLA AIGWTGIMVL TLTNTLLQMA VPDDMRGRVM
GVYMLVVMGV SQVSGLFLSS VADVLGDVPL VVGCWALVGW CIQVYLFTLW RRAPDNAAQV
ASLPRV
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