| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4355 |
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| Symbol | |
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| ID | 5541868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5606899 |
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| End bp | 5607888 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896461 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_001434397 |
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| Protein GI | 156744268 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.546359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC CGCTAATCCT CTGCGAAAAC CTGGTCAAGA TCTACAAACT CGACGAGATT
GAGATCGTCG CGCTCCAGGG TCTCGACCTG ACGGTGCAAC CCGGTGAAGT GATGGCGCTG
GTCGGCGCGA GCGGCAGCGG CAAAACGACC CTGCTCAACG TCCTCGGCGG TCTGGATCGC
CCCTCCGCCG GCAGGGTCAT CGTCGCCGGC AATGACCTGT TGAAGCTCAG CGATGCGCAA
CTCGACCGCT ACCGCCGCCA GTATGTCGGT TTTGTGTGGC AGCAAAAGGC GCGCAATCTG
ATTCCATACC TGAACGTCGA GCAAAATGTC GAACTGCCGA TGATTATGGC GGGGGTCGGC
GCGCGCGAGC GCCGTGAGTG GGCCGGTGAA CTGATCGATG CAGTCGGGCT TTCCCACCGG
CGCAACCATC GCCTGGCGCA ACTCTCCGGC GGCGAACAGC AGCGAGTTGC TATAGCCATC
GCTCTCGCCA ACCGTCCGGC GCTCCTCCTT GGCGACGAGC CGACCGGTGA GCTCGACTCC
CACACCGCTG AGACCATCTT CGAGATATTT CACGAACTGA ACCGCACCTA TGGTCTGACC
GTCGTGATCG TCTCGCATGA TCCGAACATC GCGCGTTTTG TTGATCGCGT GGTGGCGATC
CGCGATGGCA AGACCAGCAG CGAAACCCGG CGCGTGGAGA CAGAAGCCGC CGACCCGGCG
AATGGCGATG GCGCAGCGCG TGCGCATGTC TTCGAGGAAC TGGTCATGCT CGACTCCGCC
GGGCGCCTGC AAATTCCGAA GGAAATCCGC GAACGCTACA ACATTGGCGA TCGCATTCGT
ATGGAAGAGA CACCCGAAGG TTTGGTGTTG CGCCCGGTCG CTGGCGCTGC GCCGACGGTC
AAACGCCTGA CCGAACCGGA CGAGCCGCCG CCGGAAAAAC CGCGCGGCAT CAAAAAATGG
ATGAACCTTC TGCAACGCCG ACGGTCGTGA
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| Protein sequence | MSEPLILCEN LVKIYKLDEI EIVALQGLDL TVQPGEVMAL VGASGSGKTT LLNVLGGLDR
PSAGRVIVAG NDLLKLSDAQ LDRYRRQYVG FVWQQKARNL IPYLNVEQNV ELPMIMAGVG
ARERREWAGE LIDAVGLSHR RNHRLAQLSG GEQQRVAIAI ALANRPALLL GDEPTGELDS
HTAETIFEIF HELNRTYGLT VVIVSHDPNI ARFVDRVVAI RDGKTSSETR RVETEAADPA
NGDGAARAHV FEELVMLDSA GRLQIPKEIR ERYNIGDRIR MEETPEGLVL RPVAGAAPTV
KRLTEPDEPP PEKPRGIKKW MNLLQRRRS
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