| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4350 |
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| Symbol | smpB |
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| ID | 5541863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5602175 |
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| End bp | 5602651 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896456 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001434392 |
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| Protein GI | 156744263 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.08512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGGG GGAATGGCAT CGAGCGCGTG GTCGCCGATA ATCGTAAGGC GCGCCACGAT
TATTTCATCG AAGAAACCTA CGAAGCCGGA GTTGTGCTGA CCGGCAGTGA GATCAAGTCT
ATTCGCGCCG GTCAGGTGAA TCTGCGCGGC GGATATGTGC GCATCGTCAA CGGCGAAGCA
TGGTTGTACG ACGTACACAT CGCACCGTAT GAGCAGTCGG GGAAGTATTT TAATCACGAG
CCGACCCGAC CGCGCAAATT GCTGTTGCAT CGGCGCGAGA TTTCCCGCAT TGCCGGGCAG
GTCGAGCGAC AGGGATATAC GCTGGTGCCG CTGCGTCTGT ATTTACGCGG ATCGCGCGCA
AAAGTCGAGA TCGGGCTGGC GCGCGGGAAG AAGTTGTACG ACAAACGCGA AGACATCGCG
CGCCGTGAGG CACGCCGCAC TATTGATCGC GCACTCAAGG AACGAGCGCG CCACTAA
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| Protein sequence | MARGNGIERV VADNRKARHD YFIEETYEAG VVLTGSEIKS IRAGQVNLRG GYVRIVNGEA
WLYDVHIAPY EQSGKYFNHE PTRPRKLLLH RREISRIAGQ VERQGYTLVP LRLYLRGSRA
KVEIGLARGK KLYDKREDIA RREARRTIDR ALKERARH
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