| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4349 |
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| Symbol | pyrF |
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| ID | 5541862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5601311 |
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| End bp | 5602129 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896455 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001434391 |
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| Protein GI | 156744262 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0751763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCT TCGAGTCGCT GGACACTGCC GCCTGGCGCA ATCAGAGCCG GTTGTGCGTC
GGGTTGGACC CGGAGCCTGC GCGCATGCCG GATTGTCTGC CGAAAGACGC CGAGGGCATC
TATACCTTTT GTGCTGCCAT TATGGACGCC ACTGTCGACC TGGTTTGCGC ATACAAGCCG
AACGTCGCCT TCTTCGAGGC GCACGGCGCA GCCGGCTGGT CGGCGCTCGA ACGTCTTGTC
AAGCGCCGAC CGGGACCGCC GCTCATTCTC GATGCCAAGC GTGGCGATAT CGGTTCGACG
GCGGAAGCAT ATGCGCGATC CGTGTTCACC ACACTCGGCG CCGATGCGGT GACGCTGAGT
CCGTATCTCG GCAGCGACGC ACTCGAACCA TTTCTGCGGC ATGCTGATCG CGGATGTTTC
ATCCTCTGCA AAACGTCGAA CCCCGGCAGC GGCGATCTCC AGGATGCACG GCTGGCGGAT
GGGCGTCCGT TGTATCTGGC GGTTGCCGAG ATGGCGCGCG ACTGCTGGAA TATGCGCGGC
AATGTGGGGC TGGTCGTTGG GGCCACACAT CCTGCGGCGC TGGCAGACAT CCGGCGCGCC
TGCCCGGATA TGCTGATCCT GGCGCCGGGG GTCGGAGCGC AAGGCGGCGA CCTGGAAGCA
ACCGTGCGCG CCGCCGCAGC GGGCGACGAT CCGCGGTTGA TCGTCAATGT GTCGCGCACC
GTGCTGTACG CCGATCGCGG AGCAAACTTC GCTGCGGCGG CGCGCACAGC AGCCCGTCAA
CTGCGCGACG CCATCAACGC TGCGCTCCGT GCTGTGTGA
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| Protein sequence | MNFFESLDTA AWRNQSRLCV GLDPEPARMP DCLPKDAEGI YTFCAAIMDA TVDLVCAYKP
NVAFFEAHGA AGWSALERLV KRRPGPPLIL DAKRGDIGST AEAYARSVFT TLGADAVTLS
PYLGSDALEP FLRHADRGCF ILCKTSNPGS GDLQDARLAD GRPLYLAVAE MARDCWNMRG
NVGLVVGATH PAALADIRRA CPDMLILAPG VGAQGGDLEA TVRAAAAGDD PRLIVNVSRT
VLYADRGANF AAAARTAARQ LRDAINAALR AV
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