Gene Rcas_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4342 
Symbol 
ID5541855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5593742 
End bp5594185 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID640896448 
Productheat shock protein Hsp20 
Protein accessionYP_001434384 
Protein GI156744255 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.232434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.204531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACC TGACTCGCTG GGATCCCTTC CAGGAAATGA TGACCCTGCG TGAGGCGATG 
AATCAGTTGT TCGAGGAAAG CTTCGTGCGC CCCGATCTGG CGCGGGGTGG TTTCGTTCCG
GCGCTCGACC TGAGCGAAAC CGAGGACGCC TATCTGGTCG AGGCGGCGGT GCCTGGGCTC
AAGCCTGAAG ACCTGGAGGT GACGGTTGAG AACAACCTGC TGACGATCAA GGGCGAAATC
AAGCAAGAGT CGCAGGAGAC GAAGCGCAAC TATCATCGCA TCGAGCGGCG TTACGGCGCC
TTCCAGCGCC AGGTTGCCCT GCCGCGCTCA GTCAAGGCTG ATGCCATCAA AGCGACGCTG
AATAATGGCG TCCTGCGCCT GGAGATCCCT AAGGCTGAGG AGGTCAAGCC GCGCCGGATT
CTGATCAACC CGACGAGCAA CTGA
 
Protein sequence
MTNLTRWDPF QEMMTLREAM NQLFEESFVR PDLARGGFVP ALDLSETEDA YLVEAAVPGL 
KPEDLEVTVE NNLLTIKGEI KQESQETKRN YHRIERRYGA FQRQVALPRS VKADAIKATL
NNGVLRLEIP KAEEVKPRRI LINPTSN