Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4342 |
Symbol | |
ID | 5541855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5593742 |
End bp | 5594185 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896448 |
Product | heat shock protein Hsp20 |
Protein accession | YP_001434384 |
Protein GI | 156744255 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.232434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.204531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACC TGACTCGCTG GGATCCCTTC CAGGAAATGA TGACCCTGCG TGAGGCGATG AATCAGTTGT TCGAGGAAAG CTTCGTGCGC CCCGATCTGG CGCGGGGTGG TTTCGTTCCG GCGCTCGACC TGAGCGAAAC CGAGGACGCC TATCTGGTCG AGGCGGCGGT GCCTGGGCTC AAGCCTGAAG ACCTGGAGGT GACGGTTGAG AACAACCTGC TGACGATCAA GGGCGAAATC AAGCAAGAGT CGCAGGAGAC GAAGCGCAAC TATCATCGCA TCGAGCGGCG TTACGGCGCC TTCCAGCGCC AGGTTGCCCT GCCGCGCTCA GTCAAGGCTG ATGCCATCAA AGCGACGCTG AATAATGGCG TCCTGCGCCT GGAGATCCCT AAGGCTGAGG AGGTCAAGCC GCGCCGGATT CTGATCAACC CGACGAGCAA CTGA
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Protein sequence | MTNLTRWDPF QEMMTLREAM NQLFEESFVR PDLARGGFVP ALDLSETEDA YLVEAAVPGL KPEDLEVTVE NNLLTIKGEI KQESQETKRN YHRIERRYGA FQRQVALPRS VKADAIKATL NNGVLRLEIP KAEEVKPRRI LINPTSN
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