| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4335 |
|---|
| Symbol | |
|---|
| ID | 5541848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 5588040 |
|---|
| End bp | 5588651 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640896441 |
|---|
| Product | phosphoribosyl-AMP cyclohydrolase |
|---|
| Protein accession | YP_001434377 |
|---|
| Protein GI | 156744248 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.210645 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTCG ATGCGGCAGG GTTGATCCCG GTGGTCGTCC AACACGCACG CAGCGGCGAG
GTGCTGATGC TGGGATACAT GAACGAGGAG GCATTACAGC AAACGCTGGT GTCGGGTATG
GTGACGTTCT GGAGCCGGAG CCGACAGACG CTCTGGCGCA AGGGTGAAAC CTCTGGCAAT
GTGCTGCGTC TGGTCGAAAT CCGGCAGGAT TGTGATGGTG ATGCGTTGCT GGCGTTCGTG
GAACCGGCTG GACCAACGTG CCATACCGGT CGCGTGAGTT GCTTTCACCG CACGCTCGAT
GGCGATCCGG TCGAAACGCG CATGCCCGAT TCGGTCATTC TCACTGACCT TGCCAATATT
GTGGCGCAGC GCGCATCCGC ACCAAAAGAA GGCTCGTATA CTACGAAGAT GCTGACGGGA
GGCGTTGATC GGATTGGTAA GAAGATCGGC GAGGAAGCGG CGGAAGTGAT TATCGCAGCA
AAAAATAGCG CCCCCGCCGA GATTGCATGG GAAGTCGCTG ACCTGGTGTA CCACCTGCTG
GTGCTGTTGC AAAACCAGGG TATGACACTC GAAGATGTCT GGACTGAGTT GCGCCGACGC
TATGGTGGAT GA
|
|---|
| Protein sequence | MRFDAAGLIP VVVQHARSGE VLMLGYMNEE ALQQTLVSGM VTFWSRSRQT LWRKGETSGN
VLRLVEIRQD CDGDALLAFV EPAGPTCHTG RVSCFHRTLD GDPVETRMPD SVILTDLANI
VAQRASAPKE GSYTTKMLTG GVDRIGKKIG EEAAEVIIAA KNSAPAEIAW EVADLVYHLL
VLLQNQGMTL EDVWTELRRR YGG
|
|---|
| |