| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4320 |
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| Symbol | rplK |
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| ID | 5541831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5570488 |
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| End bp | 5570913 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896424 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001434362 |
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| Protein GI | 156744233 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.548408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCAAAA AGGTTACCGG GGTCGTGAAG CTGCAACTGC CCGCCGGTAA GGCGACTCCA
GCGCCGCCGG TTGGTCCGGC GTTGGGTGGT TACGGCATCA ATATCATGGC GTTTGTCAAG
GAGTATAACG AGAAGACTGC GTCACAGGCG GGAAGTATCA TTCCGGTCGA AGTGACGATC
TATTCGGATC GTTCGTTCAC GATTACGCTG AAAACGCCGC CGGCCGCCGA TCTGCTGCGC
AAAGCGGCAG GTATCGAAAA AGGCTCCGGC ACGCCGAACC GCAAGATTGC CGGCACGATT
ACGGCAAAAC AACTGCGGCA GGTGGCTGAG CAGAAAATGT CCGATCTGAA TGCGCAGAGC
ATCGAAGCCG CCGAGAAGAT TATCGCCGGC ACGGCGCGCA GTATGGGGAT CAAAATCGTC
GAGTAG
|
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| Protein sequence | MAKKVTGVVK LQLPAGKATP APPVGPALGG YGINIMAFVK EYNEKTASQA GSIIPVEVTI
YSDRSFTITL KTPPAADLLR KAAGIEKGSG TPNRKIAGTI TAKQLRQVAE QKMSDLNAQS
IEAAEKIIAG TARSMGIKIV E
|
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