| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4319 |
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| Symbol | rplA |
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| ID | 5541830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5569715 |
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| End bp | 5570437 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896423 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001434361 |
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| Protein GI | 156744232 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.686674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACGCC GACACGGAAA AAAGTACCTT GAGGCGCTCA AGAAGATTGA TCGGCAGCGC
CTCTATACAC CGGAAGAGGC GATCAAACTG CTGAAGGAAA CGTCGTTTAC GACGTTCGAT
CCAACCGTCG AAGTCCATCT GCGGCTGGGC ATTGATCCGC GTCACGCTGA TCAGACGATC
CGCACGACGG TTTCTCTGCC GCACGGCACC GGCAAGACGG TGCGGGTGCT GGTGTTTGCT
CAGGGTGAGG CGGCGCAGGC TGCGCGTGAG GCGGGCGCTG ATTTTGTCGG CGCCGATGAC
CTGATTGCCC GGATCGATAA GGAGAATTTC TTCGATTTCG ACATTGCGAT TGCGACTCCC
GATATGATGG GGAAAGTCGG GCGCATCGGG CGGAAGCTCG GTCCGCGCGG GTTGATGCCG
AACCCAAAGA GTGGGACGGT CGTTCAACCT GAGGACCTGC CGCGCACGAT CCGTGAGGTG
CGCGGTGGGC GTGTTGAGTT CCGCAATGAT AAAACCGGTC TGCTGCACGT GGCGGTTGGG
AAACTGAGTT TCAATGAGCC GCAGATTTAT GAGAATATTG CTGCGCTGAT GGAGGCGGTC
AAAGCGGCGC GTCCGGCTGC CGCAAAAGGG ACGTATATCA GGAGTGTGAC CTTTACCAGT
ACGATGAGTC CTGGTATTCG AGTCGATCCA TCGGCAGCAC AGGCGATGAA ACCAGCAGTC
TGA
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| Protein sequence | MPRRHGKKYL EALKKIDRQR LYTPEEAIKL LKETSFTTFD PTVEVHLRLG IDPRHADQTI
RTTVSLPHGT GKTVRVLVFA QGEAAQAARE AGADFVGADD LIARIDKENF FDFDIAIATP
DMMGKVGRIG RKLGPRGLMP NPKSGTVVQP EDLPRTIREV RGGRVEFRND KTGLLHVAVG
KLSFNEPQIY ENIAALMEAV KAARPAAAKG TYIRSVTFTS TMSPGIRVDP SAAQAMKPAV
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