Gene Rcas_4317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4317 
SymbolrplL 
ID5541828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5568428 
End bp5568850 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID640896421 
Product50S ribosomal protein L7/L12 
Protein accessionYP_001434359 
Protein GI156744230 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCG AGAAGGTCGA GTCGGTCATT GCGAGTATCG AGGCGCTGAA CGTCCTCGAA 
TTGGTGGAAC TGAAGAAGGA ACTGGAGTCG CGCTGGGGTG TGACCGCCGC CGCTCCGGTG
ATGCCGATGG GCGGAATGGT GATGCCCGCA GCCGCAGCCG CGCCTGCCGC AGGTGATGGC
GGCGCCGCAG CCGCGCCCGC CGTCGAGGAG AAGACGGAGT TCGACGTCAT TCTGTCGGCC
GTCGGTCCGA ACAAGATTCA GGTTATCAAG GCGGTGCGTG AATTGACGAA CCTGGGTCTG
AAAGAGGCAA AGGACCTGGT CGAAGGCGCG CCCAAGCCGG TGAAGGAAGG CGTCAGCAAG
GAAGAGGCGG AAGCGGCAAA GGCGAAACTG GTCGAGGCGG GCGCAACGGT CGAGATCAAG
TAG
 
Protein sequence
MASEKVESVI ASIEALNVLE LVELKKELES RWGVTAAAPV MPMGGMVMPA AAAAPAAGDG 
GAAAAPAVEE KTEFDVILSA VGPNKIQVIK AVRELTNLGL KEAKDLVEGA PKPVKEGVSK
EEAEAAKAKL VEAGATVEIK