| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4307 |
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| Symbol | |
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| ID | 5541818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5556845 |
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| End bp | 5558251 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896413 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_001434351 |
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| Protein GI | 156744222 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3379] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATC CTCGTCTTCT CATTATCGGC CTCGATTGCG CCGAACCATC GCTGGCGTTC
GATCAATGGC GCGCCGATCT GCCCACCCTC AATCGCTTGA TGGCAGAGGG AGTCTACGGC
GAGTTGGAGA GTTGCATTCC GGCAATCACC GTGCCTGCCT GGAGTTGCAT GATGAGCGGG
CGCGATCCGG GGGAACTTGG CGTTTACGGC TTTCGCAACC GCGCCGATCG TTCCTATGGT
CGTATGGTCG TCGCCGATAG TCGTGCCATT CGTTTTCCAC GTTTGTGGGA CATCCTTGGC
AATGCGGGAT GGCGCGTCGC GGTGATTGGC GTGCCGGGGA CGTACCCGCC ACCGCCGGTC
AATGGCGCGC TCATCTCGTG TTTCCTCGCA CCCTCCACGG ACGCAGCGTA TACCTTTCCG
CCGACACTCG CCGGGCGCGT TGCCGCCTGG ACCGCAGCCG CGACGCCGGG GCGTCCGTAT
CTGCTCGATG TGCCGGATTT CCGTTCCGAC GACAAACAGC GTATCGCGCG CGACATCTAT
GCCATGTGCG ATCAGCGCTT CGCAGTGGCA ACGGCGCTGC TGGAAGAAGA GCATCCCGAC
TTTCTGATGC TGGTGGATAT GGGCGTGGAT CGCATCCACC ACGCGCTCTG GAAGCATATG
GACCCGCGTC ATCCGTTGTT TGTTCCCGAC TCGCCTTTCG CCGACGCCAT TCGCGCGTAC
TATCGTCACG TGGATACGCA GATCGCCGGT CTGCTGACGC GCTGCGGACC CGACACGGCA
GTCCTGATCG TGTCGGACCA CGGCGCGCGC CCGTTGATGG GAGGCGTGCG GATCAACCAG
TGGCTGATCG AACAGGGTGA TCTGAGCGTC CGGGCAATGC CGGACACCCC GACGAGTCTC
GATCAGGTCG AGGTTGACTG GTCACGCACG CGCGTCTGGG GCGCCGGCGG CTACTACGGG
CGAATTTTTC TCAATGTGCG CGGGCGTGAG CCGCAGGGAG CCATCTCAGC AGCAGAGTAC
GAACGTGTGC GCACCGATCT TGCAGCGCGC CTGGAAGCCA TGCCAGGACC CGACGGATGT
CCGCTGGGCA ATCGTGTTTT CACACCCCGG CAACTCTACC GCGCAGTGCG TGGCATCGCG
CCCGATCTGA TCGTCTACTT CGGCGATCTT GGATGGCGCG CGGTCGGAAC GATCGGCGGC
ACGGGCATCT TCACCCAGGA AAACGACACC GGTCCTGATG ACGCCAATCA TGCGCAGCAC
GGAATGTTCA TCTGGCGCGA CCCGCAACGT CCGGGCGGCG GACGGCGATT CGACAGGGTG
CAGATTTACG ATATACTGCC GACTCTGTTG AGACGGTTCA ACATGCCGAT TCCTGAAGGA
CTACGCGGCA CGGCGCTGAA TCTATAA
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| Protein sequence | MTYPRLLIIG LDCAEPSLAF DQWRADLPTL NRLMAEGVYG ELESCIPAIT VPAWSCMMSG
RDPGELGVYG FRNRADRSYG RMVVADSRAI RFPRLWDILG NAGWRVAVIG VPGTYPPPPV
NGALISCFLA PSTDAAYTFP PTLAGRVAAW TAAATPGRPY LLDVPDFRSD DKQRIARDIY
AMCDQRFAVA TALLEEEHPD FLMLVDMGVD RIHHALWKHM DPRHPLFVPD SPFADAIRAY
YRHVDTQIAG LLTRCGPDTA VLIVSDHGAR PLMGGVRINQ WLIEQGDLSV RAMPDTPTSL
DQVEVDWSRT RVWGAGGYYG RIFLNVRGRE PQGAISAAEY ERVRTDLAAR LEAMPGPDGC
PLGNRVFTPR QLYRAVRGIA PDLIVYFGDL GWRAVGTIGG TGIFTQENDT GPDDANHAQH
GMFIWRDPQR PGGGRRFDRV QIYDILPTLL RRFNMPIPEG LRGTALNL
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