| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4304 |
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| Symbol | |
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| ID | 5541815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5552513 |
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| End bp | 5554120 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640896410 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001434348 |
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| Protein GI | 156744219 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCG AGAACGCGCG AGTCGTTGCT CTTCCTCTGT TCCGAACGTC CTGGATGGTC
ATTGCACTGG CGCTTGTCGC GTATGGCGCC ATTCTGGCAG GCAGCATCAT TCCCACGATG
ACCGGCGCTG CGGTCAGCAG CATAGCCACA GCGGTGTTGG GCGGCGCGCT TGCCATGTAC
ACCGGTATGC GCACCCGGGC GGCGCCGGTG CGTCTTGGGG GGCGCGCTAC CGCTGCCCGC
CGCTCCTACC TGACTCTGGC GTTCGCTGCG GTCGGTATGT TGTACCTGGC AGTGGTCGCC
GGTGCGCTCA ACACGAGTGC GGGAACGTTG TGGACCTGCC AGACCTGGCC CGGTTGCGAG
GCGTCCGGCA GCGGCGACTG GCCGGCGCTG GCGCACCGTG GGCTGGCTGG CGTCGCCACG
ATCCTGATCG CGGCGCTGGC GATGCAGACC TGGCGTATCA GACACGAACG CGCTCTGCGT
GTCGCTGTTG CTTGTGCGCT GGGCTTGATG CTGGTGCAGA ACATTGTCGG GCTTGTGCAG
GTACTGCTGG CGCAGGCGGG CGAGTCGCTG CCGCTGGCGG TCGCGCGCCT GACGCACCTG
GGGCTGAGCG CCACTGCATG GGGAGCGCTG GTGGTGCTGG TGACGCTGGC GCTGCGCCGT
CCGTTTCCTT CGGTGGTTGC CGCACCATCG CCTGCAACAG TCGCGCGCCC TGGTCTAACC
GATACAACGT TGCTGGAAGG CAAGCCATCG CTGCTGAAGG ACTACGTGAG CCTGACCAAG
CCGGGAGTCA TTTCGCTGCT TATTCTGACG ACGATCACCA GCATGTATAT CACGCCGGCC
GGCATTCCCG AATGGTCGCT GGTGCTCTGG ACGACTATCG GCGGTTGGTT GATGGCGTCG
GGGTCGCATT CCATCAACTG TTACCTGGAT AAAGACATCG ACATCAACAT GGGGCGCACC
AGCCGCCGTC CCATTCCGAG CGGGCGCATT CCGGCGTGGC ATGCGCTGGC GCTTGGCGTT
GTGCTCGGCA TGATTGCCTT CGCTATCCTG GCGATATTTG TTAACATGCT GACAGCGCTG
CTGGCACTCG CCGGGTTTTT CTACTACGTC GTCATCTACA CCATCTGGCT GAAGCGCACC
TCGAAGCATA ACATCGTCAT CGGCGGCGGA GCGGGCGCAT TCCCGCCACT GGTCGGCTGG
GCGGCGGTGA CCGGTTCGCT GGCGCCGGAG GCGCTGCTCC TCTGGTTGAT CGTGTTCTTC
TGGACGCCGC CACACTTCTG GGCGTTGGCG CTTATCCGCG AGAAGGATTA CGCCCGCGCC
GGGGTGCCGA TGCTGCCGGT GGTGGCAGGC GACGTCGAGA CGCGCCGGCA GATTGTGCTG
TACACACTCT CTATGCTGGC GCTCACCGCA CTTCCACCCC TGCTGGGAAT GCTGGGCTGG
TCCTACCTGC TCATGGCGTC GATCTTCGGC GGTCTGTTCC TGTACTATGC GCTGAAACTT
CGTCGCGATG GAACCACAGC AACTGCCTGG GCGCTCTACA AGTATTCGTT GCTCTACCTG
GCGCTCCTCT TTGTCGCAAT GGTCGTAGAT CGCGCGGTGT TTGCGTAA
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| Protein sequence | MRRENARVVA LPLFRTSWMV IALALVAYGA ILAGSIIPTM TGAAVSSIAT AVLGGALAMY
TGMRTRAAPV RLGGRATAAR RSYLTLAFAA VGMLYLAVVA GALNTSAGTL WTCQTWPGCE
ASGSGDWPAL AHRGLAGVAT ILIAALAMQT WRIRHERALR VAVACALGLM LVQNIVGLVQ
VLLAQAGESL PLAVARLTHL GLSATAWGAL VVLVTLALRR PFPSVVAAPS PATVARPGLT
DTTLLEGKPS LLKDYVSLTK PGVISLLILT TITSMYITPA GIPEWSLVLW TTIGGWLMAS
GSHSINCYLD KDIDINMGRT SRRPIPSGRI PAWHALALGV VLGMIAFAIL AIFVNMLTAL
LALAGFFYYV VIYTIWLKRT SKHNIVIGGG AGAFPPLVGW AAVTGSLAPE ALLLWLIVFF
WTPPHFWALA LIREKDYARA GVPMLPVVAG DVETRRQIVL YTLSMLALTA LPPLLGMLGW
SYLLMASIFG GLFLYYALKL RRDGTTATAW ALYKYSLLYL ALLFVAMVVD RAVFA
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