Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4300 |
Symbol | |
ID | 5541811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5547415 |
End bp | 5548524 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640896406 |
Product | phosphate binding protein |
Protein accession | YP_001434344 |
Protein GI | 156744215 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | [TIGR02136] phosphate binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAGCA GGCTTTATCG CGGCACTGTG CTTTCAATTG CCCTGCTTCT CTCGGCGTGC ACCGGGGCCG CTGCACCATC TCCCACGCCC ACGCCGTCCC CTGCGCCGAC TGCCGCACCA AGCGCCACTC CGCAGATCGT CTCTATTCAG CCAACCGCAA CGCCTTTTCC TGAGTCGATG ACGCGCCTCG ATCTGAGTGG CGAGATTATT ATCGACGGCT CAAGCACCGT GTACCCGATC ACCGAACTTG CGATGCAACA GTTCGCAGCG GTGGCGCCAC GGGTGACTAT TCAACTCGGA GTCAGCGGCA CCGGCGGCGG GTTCAAGAAA TTCTGTGCAG GCATTACCGA CATCTCGAAC GCTTCACGAC CGATTAAGCC GGACGAGAGC GACACCTGCC GCGCCAATGG CATCGCGTTC GTCGAAATAC CGGTTGCTTT CGATGGCATC TCGGTGATCA TCAATCGAGA CAACACATGG GCGCAGTGCA TGACCGTCGA TGATCTGAAA CGGATGTGGG CGCCCGAGTC GGAAGGAAGC GTGACCACAT GGCGGCAAAT ACGCTCCGAC TGGCCCGATC AACCGTTCAA ACTGTACGCG CCAGGGGTTG ACTCCGGAAC ACACGACTAC TTCACTGCGG CGATCGTTGG CAAGGAAGAT GCCAGTCGCA ATGATTATAT CGGCAGCGAA GACGATTATG TGCTCATGCA GCGCGTCATC GAAGATGCGC AGGGGATTGC GTATGTCGGA TACGCCTACT ACCAGGAGTA TGCCGACAAA GTCGGCGTAG TAGCCGTCGA TGCAGGGCAG GGGTGCGTAT CGCCCTCACT CACCACGATC ACGGAAGGCA CATATACACC ACTATCACGT CCATTGTTCA TTTATGTGCG CGCTGATCGT CTCGACCGAC CGGCGATGCT GGCATTCGTT GAATTCTATA TCAACCGCGC AGAACAACTG GTTCAAGATG CGCGCTACAT CCCGTTGCCG CAGCGCGCCT ATGAACTGGT GCAGCAGCGC GTTGACAGGC GGGTGACAGG TTCAATCTTC GACAAGCCGG TGCCGGTTGG CGTTTCAATC GATGAGTTGC TGATGCTGGA GGGGCAGTGA
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Protein sequence | MFSRLYRGTV LSIALLLSAC TGAAAPSPTP TPSPAPTAAP SATPQIVSIQ PTATPFPESM TRLDLSGEII IDGSSTVYPI TELAMQQFAA VAPRVTIQLG VSGTGGGFKK FCAGITDISN ASRPIKPDES DTCRANGIAF VEIPVAFDGI SVIINRDNTW AQCMTVDDLK RMWAPESEGS VTTWRQIRSD WPDQPFKLYA PGVDSGTHDY FTAAIVGKED ASRNDYIGSE DDYVLMQRVI EDAQGIAYVG YAYYQEYADK VGVVAVDAGQ GCVSPSLTTI TEGTYTPLSR PLFIYVRADR LDRPAMLAFV EFYINRAEQL VQDARYIPLP QRAYELVQQR VDRRVTGSIF DKPVPVGVSI DELLMLEGQ
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